Information for 4-AGTCGGAGCCTCC (Motif 7)

G C T A A C T G A C G T A G T C A C T G A C T G C G T A C T A G A G T C A G T C A G C T A G T C A G T C
Reverse Opposite:
A C T G A C T G C T G A A C T G A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C A G T
p-value:1e-10
log p-value:-2.477e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.4 +/- 26.7bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AGTCGGAGCCTCC
---CGGAGC----
 G C T A A C T G A C G T A G T C A C T G A C T G C G T A C T A G A G T C A G T C A G C T A G T C A G T C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTCGGAGCCTCC
GAGSCCGAGC----
 A C G T G C T A A C T G A C G T A G T C A C T G A C T G C G T A C T A G A G T C A G T C A G C T A G T C A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGTCGGAGCCTCC--
TGCCTGCGYCMCCTT
 G C T A A C T G A C G T A G T C A C T G A C T G C G T A C T A G A G T C A G T C A G C T A G T C A G T C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGTCGGAGCCTCC
RGKGGGCGGAGC----
 A C G T A C G T A C G T G C T A A C T G A C G T A G T C A C T G A C T G C G T A C T A G A G T C A G T C A G C T A G T C A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGTCGGAGCCTCC-
----GGAAATTCCC
 G C T A A C T G A C G T A G T C A C T G A C T G C G T A C T A G A G T C A G T C A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGTCGGAGCCTCC
GGGGGCGGGGCC---
 A C G T A C G T G C T A A C T G A C G T A G T C A C T G A C T G C G T A C T A G A G T C A G T C A G C T A G T C A G T C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGTCGGAGCCTCC-
----GGAAANCCCC
 G C T A A C T G A C G T A G T C A C T G A C T G C G T A C T A G A G T C A G T C A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGTCGGAGCCTCC----
-NNNGGGGCGCCCCCNN
 G C T A A C T G A C G T A G T C A C T G A C T G C G T A C T A G A G T C A G T C A G C T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGTCGGAGCCTCC----
-TATCGACCCCCCACAG
 G C T A A C T G A C G T A G T C A C T G A C T G C G T A C T A G A G T C A G T C A G C T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGTCGGAGCCTCC
-GGGGGAATCCCC
 G C T A A C T G A C G T A G T C A C T G A C T G C G T A C T A G A G T C A G T C A G C T A G T C A G T C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C