Information for 1-AACGGCGAGG (Motif 6)

C G T A G T C A A T G C A C T G A T C G A T G C C T A G G T C A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A T C G A T G C T A G C T A C G A C G T G C A T
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.837
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif96.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets55.9 +/- 23.8bp
Average Position of motif in Background56.0 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AACGGCGAGG----
NNAGGGGCGGGGTNNA
 A C G T A C G T C G T A G T C A A T G C A C T G A T C G A T G C C T A G G T C A A C T G A C T G A C G T A C G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

Klf12/MA0742.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AACGGCGAGG--
NANAAGGGCGTGGTC
 A C G T A C G T A C G T C G T A G T C A A T G C A C T G A T C G A T G C C T A G G T C A A C T G A C T G A C G T A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AACGGCGAGG----
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T C G T A G T C A A T G C A C T G A T C G A T G C C T A G G T C A A C T G A C T G A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AACGGCGAGG----
CAAAGGCGTGGCCAG
 A C G T C G T A G T C A A T G C A C T G A T C G A T G C C T A G G T C A A C T G A C T G A C G T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AACGGCGAGG-
---GGCGCGCT
 C G T A G T C A A T G C A C T G A T C G A T G C C T A G G T C A A C T G A C T G A C G T
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AACGGCGAGG
TAATGGCGGNC
 A C G T C G T A G T C A A T G C A C T G A T C G A T G C C T A G G T C A A C T G A C T G
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AACGGCGAGG-
-TGGGTGGGGC
 C G T A G T C A A T G C A C T G A T C G A T G C C T A G G T C A A C T G A C T G A C G T
A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AACGGCGAGG-
-DGGGYGKGGC
 C G T A G T C A A T G C A C T G A T C G A T G C C T A G G T C A A C T G A C T G A C G T
A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AACGGCGAGG-
-GGGGNGGGGC
 C G T A G T C A A T G C A C T G A T C G A T G C C T A G G T C A A C T G A C T G A C G T
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AACGGCGAGG
NHAACBGYYV--
 A C G T A C G T C G T A G T C A A T G C A C T G A T C G A T G C C T A G G T C A A C T G A C T G
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T A C G T