Information for 3-TCGCCCGGCAGGT (Motif 5)

C A G T A T G C A T C G A T G C A G T C G A T C C T A G A C T G A G T C C G T A A T C G T A C G C G A T
Reverse Opposite:
C G T A A T G C A T G C C G A T A C T G A G T C A G T C C A T G A C T G T A C G A T G C A T C G G C T A
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.763
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif82.7
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets42.8 +/- 20.6bp
Average Position of motif in Background47.5 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TCGCCCGGCAGGT----
-----SDGCAGGTGCNS
 C A G T A T G C A T C G A T G C A G T C G A T C C T A G A C T G A G T C C G T A A T C G T A C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.63
Offset:6
Orientation:forward strand
Alignment:TCGCCCGGCAGGT--
------AACAGGTGT
 C A G T A T G C A T C G A T G C A G T C G A T C C T A G A C T G A G T C C G T A A T C G T A C G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCGCCCGGCAGGT--
CCACACAGCAGGAGA
 C A G T A T G C A T C G A T G C A G T C G A T C C T A G A C T G A G T C C G T A A T C G T A C G C G A T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCGCCCGGCAGGT----
--DCHCAGCAGGRGGCC
 C A G T A T G C A T C G A T G C A G T C G A T C C T A G A C T G A G T C C G T A A T C G T A C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCGCCCGGCAGGT--
---CACAGCAGGGGG
 C A G T A T G C A T C G A T G C A G T C G A T C C T A G A C T G A G T C C G T A A T C G T A C G C G A T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCGCCCGGCAGGT--
----AAGGCAAGTGT
 C A G T A T G C A T C G A T G C A G T C G A T C C T A G A C T G A G T C C G T A A T C G T A C G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TCGCCCGGCAGGT---
------NNCAGGTGNN
 C A G T A T G C A T C G A T G C A G T C G A T C C T A G A C T G A G T C C G T A A T C G T A C G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCGCCCGGCAGGT--
CCACACAGCAGGAGA
 C A G T A T G C A T C G A T G C A G T C G A T C C T A G A C T G A G T C C G T A A T C G T A C G C G A T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.60
Offset:7
Orientation:forward strand
Alignment:TCGCCCGGCAGGT----
-------VCAGGTRDRY
 C A G T A T G C A T C G A T G C A G T C G A T C C T A G A C T G A G T C C G T A A T C G T A C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TCGCCCGGCAGGT---
------GACAGGTGTN
 C A G T A T G C A T C G A T G C A G T C G A T C C T A G A C T G A G T C C G T A A T C G T A C G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A