Information for 2-RMWGYTGCWRRRGAAC (Motif 3)

C T A G T G A C C G T A A C T G A G C T A G C T A C T G A G T C C G A T C T A G C T A G C T A G A C T G C G T A C T G A A G T C
Reverse Opposite:
A C T G A G C T A C G T A G T C A G T C A G T C G A T C G C A T A C T G G T A C C T G A C T G A A G T C C G A T A C T G A G T C
p-value:1e-11
log p-value:-2.685e+01
Information Content per bp:1.797
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.6 +/- 16.7bp
Average Position of motif in Background49.8 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:RMWGYTGCWRRRGAAC-
--KGTTGCTAGGMAACA
 C T A G T G A C C G T A A C T G A G C T A G C T A C T G A G T C C G A T C T A G C T A G C T A G A C T G C G T A C T G A A G T C A C G T
A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:RMWGYTGCWRRRGAAC
-CTGTTGCTAGGS---
 C T A G T G A C C G T A A C T G A G C T A G C T A C T G A G T C C G A T C T A G C T A G C T A G A C T G C G T A C T G A A G T C
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:RMWGYTGCWRRRGAAC
-----TTCTNMGGAA-
 C T A G T G A C C G T A A C T G A G C T A G C T A C T G A G T C C G A T C T A G C T A G C T A G A C T G C G T A C T G A A G T C
A C G T A C G T A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:RMWGYTGCWRRRGAAC
---ANTTCTNNAGAA-
 C T A G T G A C C G T A A C T G A G C T A G C T A C T G A G T C C G A T C T A G C T A G C T A G A C T G C G T A C T G A A G T C
A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----RMWGYTGCWRRRGAAC---
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C T G A G C T A G C T A C T G A G T C C G A T C T A G C T A G C T A G A C T G C G T A C T G A A G T C A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RMWGYTGCWRRRGAAC
NNCGTTGCTATGGNN-
 C T A G T G A C C G T A A C T G A G C T A G C T A C T G A G T C C G A T C T A G C T A G C T A G A C T G C G T A C T G A A G T C
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T

Stat6/MA0520.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:RMWGYTGCWRRRGAAC--
---ANTTCTCAGGAANNN
 C T A G T G A C C G T A A C T G A G C T A G C T A C T G A G T C C G A T C T A G C T A G C T A G A C T G C G T A C T G A A G T C A C G T A C G T
A C G T A C G T A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----RMWGYTGCWRRRGAAC
NNNNAGCAGCTGCTGAN----
 A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C T G A G C T A G C T A C T G A G T C C G A T C T A G C T A G C T A G A C T G C G T A C T G A A G T C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:RMWGYTGCWRRRGAAC-
---GTTGCCATGGNAAC
 C T A G T G A C C G T A A C T G A G C T A G C T A C T G A G T C C G A T C T A G C T A G C T A G A C T G C G T A C T G A A G T C A C G T
A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-RMWGYTGCWRRRGAAC
AGCAGCTGCT-------
 A C G T C T A G T G A C C G T A A C T G A G C T A G C T A C T G A G T C C G A T C T A G C T A G C T A G A C T G C G T A C T G A A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T