Information for 10-SMRKTGATGYATGGKC (Motif 22)

A T G C G T C A C T A G A C G T A C G T A C T G C G T A A C G T A C T G A G C T C T G A A C G T A C T G C T A G C A G T A G T C
Reverse Opposite:
A C T G G T A C A G T C A G T C C G T A A G C T C T G A A G T C C G T A A C G T A G T C C G T A T G A C A G T C C A G T A T C G
p-value:1e-3
log p-value:-8.690e+00
Information Content per bp:1.825
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 14.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa9/MA0594.1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:SMRKTGATGYATGGKC
----TGATTTATGGC-
 A T G C G T C A C T A G A C G T A C G T A C T G C G T A A C G T A C T G A G C T C T G A A C G T A C T G C T A G C A G T A G T C
A C G T A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:2
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:SMRKTGATGYATGGKC
----TGATTTATGGCC
 A T G C G T C A C T A G A C G T A C G T A C T G C G T A A C G T A C T G A G C T C T G A A C G T A C T G C T A G C A G T A G T C
A C G T A C G T A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:SMRKTGATGYATGGKC
---ATGATKGATGRC-
 A T G C G T C A C T A G A C G T A C G T A C T G C G T A A C G T A C T G A G C T C T G A A C G T A C T G C T A G C A G T A G T C
A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:SMRKTGATGYATGGKC
----TGATTTATGGCC
 A T G C G T C A C T A G A C G T A C G T A C T G C G T A A C G T A C T G A G C T C T G A A C G T A C T G C T A G C A G T A G T C
A C G T A C G T A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---SMRKTGATGYATGGKC
NNNNNATTGATGNGTGN--
 A C G T A C G T A C G T A T G C G T C A C T A G A C G T A C G T A C T G C G T A A C G T A C T G A G C T C T G A A C G T A C T G C T A G C A G T A G T C
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:SMRKTGATGYATGGKC
---NTGATTTATGGCC
 A T G C G T C A C T A G A C G T A C G T A C T G C G T A A C G T A C T G A G C T C T G A A C G T A C T G C T A G C A G T A G T C
A C G T A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:SMRKTGATGYATGGKC
----TGATTGATGA--
 A T G C G T C A C T A G A C G T A C G T A C T G C G T A A C G T A C T G A G C T C T G A A C G T A C T G C T A G C A G T A G T C
A C G T A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:SMRKTGATGYATGGKC
----TGATTRATGGCY
 A T G C G T C A C T A G A C G T A C G T A C T G C G T A A C G T A C T G A G C T C T G A A C G T A C T G C T A G C A G T A G T C
A C G T A C G T A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:SMRKTGATGYATGGKC
---ATGATGCAAT---
 A T G C G T C A C T A G A C G T A C G T A C T G C G T A A C G T A C T G A G C T C T G A A C G T A C T G C T A G C A G T A G T C
A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:SMRKTGATGYATGGKC
---MTGATGCAAT---
 A T G C G T C A C T A G A C G T A C G T A C T G C G T A A C G T A C T G A G C T C T G A A C G T A C T G C T A G C A G T A G T C
A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T