Information for 8-CTTTTGAAAA (Motif 20)

A G T C A C G T A C G T A C G T A C G T A T C G C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A C G T A A C T G
p-value:1e-5
log p-value:-1.279e+01
Information Content per bp:1.956
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 10.2bp
Average Position of motif in Background49.4 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CTTTTGAAAA--
--TTTGAAACCG
 A G T C A C G T A C G T A C G T A C G T A T C G C G T A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTTTTGAAAA
-ATTTGAATT
 A G T C A C G T A C G T A C G T A C G T A T C G C G T A C G T A C G T A C G T A
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTTTTGAAAA
---TGGAAAA
 A G T C A C G T A C G T A C G T A C G T A T C G C G T A C G T A C G T A C G T A
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTTTGAAAA-
-NATGGAAAAN
 A G T C A C G T A C G T A C G T A C G T A T C G C G T A C G T A C G T A C G T A A C G T
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTTTGAAAA
CCTTTGATGT
 A G T C A C G T A C G T A C G T A C G T A T C G C G T A C G T A C G T A C G T A
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTGAAAA--
ANATTTTTGCAANTN
 A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A T C G C G T A C G T A C G T A C G T A A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTTTTGAAAA
GCTCGTAAAAA
 A C G T A G T C A C G T A C G T A C G T A C G T A T C G C G T A C G T A C G T A C G T A
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTGAAAA
NATTGTGCAAT
 A C G T A G T C A C G T A C G T A C G T A C G T A T C G C G T A C G T A C G T A C G T A
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTTTTGAAAA
AACCTTATAT---
 A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A T C G C G T A C G T A C G T A C G T A
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTTTTGAAAA---
AAATAAGAAAAAAC
 A C G T A G T C A C G T A C G T A C G T A C G T A T C G C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C