Information for 1-GGCCAGGCTGGCC (Motif 2)

T C A G A T C G A T G C A G T C C T G A A T C G A C T G A G T C C G A T A C T G A T C G A G T C A G T C
Reverse Opposite:
C T A G C T A G T A G C A G T C C G T A A C T G A G T C A T G C A G C T T C A G T A C G T A G C A G T C
p-value:1e-12
log p-value:-2.780e+01
Information Content per bp:1.784
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif111.7
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets53.1 +/- 28.2bp
Average Position of motif in Background48.8 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGCCAGGCTGGCC-
AGGNCANNGTGACCT
 A C G T T C A G A T C G A T G C A G T C C T G A A T C G A C T G A G T C C G A T A C T G A T C G A G T C A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCCAGGCTGGCC--
GGTCANNGTGACCTN
 T C A G A T C G A T G C A G T C C T G A A T C G A C T G A G T C C G A T A C T G A T C G A G T C A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGCCAGGCTGGCC
-----NGCTN---
 T C A G A T C G A T G C A G T C C T G A A T C G A C T G A G T C C G A T A C T G A T C G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGGCTGGCC--
AAGGTCACGGTGACCTG
 A C G T A C G T T C A G A T C G A T G C A G T C C T G A A T C G A C T G A G T C C G A T A C T G A T C G A G T C A G T C A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGCCAGGCTGGCC
---CCTGCTGAGH
 T C A G A T C G A T G C A G T C C T G A A T C G A C T G A G T C C G A T A C T G A T C G A G T C A G T C
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

EGR2/MA0472.2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGGCTGGCC
ACGCCCACGCA----
 A C G T A C G T T C A G A T C G A T G C A G T C C T G A A T C G A C T G A G T C C G A T A C T G A T C G A G T C A G T C
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGCCAGGCTGGCC
---CACGCA----
 T C A G A T C G A T G C A G T C C T G A A T C G A C T G A G T C C G A T A C T G A T C G A G T C A G T C
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GGCCAGGCTGGCC
------GCTGTG-
 T C A G A T C G A T G C A G T C C T G A A T C G A C T G A G T C C G A T A C T G A T C G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGCCAGGCTGGCC--
AGNACAGNCTGTTCTN
 A C G T T C A G A T C G A T G C A G T C C T G A A T C G A C T G A G T C C G A T A C T G A T C G A G T C A G T C A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGCCAGGCTGGCC
---TWGTCTGV--
 T C A G A T C G A T G C A G T C C T G A A T C G A C T G A G T C C G A T A C T G A T C G A G T C A G T C
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T