Information for 10-GGCCGAGCTCCCG (Motif 13)

A T C G A C T G A G T C A G T C A T C G T C G A C T A G A G T C A C G T A G T C A G T C G T A C A T C G
Reverse Opposite:
A T G C C A T G A C T G A C T G G T C A T C A G A G T C A G C T A T G C C T A G A C T G A G T C A T G C
p-value:1e-9
log p-value:-2.143e+01
Information Content per bp:1.809
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 30.3bp
Average Position of motif in Background47.3 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGAGCTCCCG-
TTGGCANNNTGCCAAG
A C G T A C G T A T C G A C T G A G T C A G T C A T C G T C G A C T A G A G T C A C G T A G T C A G T C G T A C A T C G A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGAGCTCCCG
CAGGCCNNGGCCNN-
A C G T A C G T A T C G A C T G A G T C A G T C A T C G T C G A C T A G A G T C A C G T A G T C A G T C G T A C A T C G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GGCCGAGCTCCCG
------GCTCCG-
A T C G A C T G A G T C A G T C A T C G T C G A C T A G A G T C A C G T A G T C A G T C G T A C A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCCGAGCTCCCG
AGGCCTAG------
A C G T A T C G A C T G A G T C A G T C A T C G T C G A C T A G A G T C A C G T A G T C A G T C G T A C A T C G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCCGAGCTCCCG
GAGSCCGAGC-----
A C G T A C G T A T C G A C T G A G T C A G T C A T C G T C G A C T A G A G T C A C G T A G T C A G T C G T A C A T C G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCCGAGCTCCCG
GGCCCCGCCCCC-
A T C G A C T G A G T C A G T C A T C G T C G A C T A G A G T C A C G T A G T C A G T C G T A C A T C G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCCGAGCTCCCG----
YCAGGCWCAGTACCAGGCTC
A C G T A C G T A C G T A T C G A C T G A G T C A G T C A T C G T C G A C T A G A G T C A C G T A G T C A G T C G T A C A T C G A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGCCGAGCTCCCG
--CNGTCCTCCC-
A T C G A C T G A G T C A G T C A T C G T C G A C T A G A G T C A C G T A G T C A G T C G T A C A T C G
A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCCGAGCTCCCG
TGGCAGNCTGCCAG
A C G T A T C G A C T G A G T C A G T C A T C G T C G A C T A G A G T C A C G T A G T C A G T C G T A C A T C G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGCCGAGCTCCCG---
------GGTCCCGCCC
A T C G A C T G A G T C A G T C A T C G T C G A C T A G A G T C A C G T A G T C A G T C G T A C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C