Information for 2-TKCWMATCTSCTA (Motif 3)

A C G T A C T G A G T C C G T A G T C A G T C A C G A T A T G C A C G T A T C G A G T C G A C T C G T A
Reverse Opposite:
A C G T C T G A A C T G A T G C C G T A A T C G C G T A A C G T A C G T C G A T A C T G G T A C C G T A
p-value:1e-16
log p-value:-3.784e+01
Information Content per bp:1.862
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.1 +/- 27.3bp
Average Position of motif in Background29.7 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gata1/MA0035.3/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TKCWMATCTSCTA
TTCTTATCTGT--
 A C G T A C T G A G T C C G T A G T C A G T C A C G A T A T G C A C G T A T C G A G T C G A C T C G T A
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TKCWMATCTSCTA
AGATTCTTATCTGT--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A G T C A G T C A C G A T A T G C A C G T A T C G A G T C G A C T C G T A
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TKCWMATCTSCTA
--CTAATCCTCTT
 A C G T A C T G A G T C C G T A G T C A G T C A C G A T A T G C A C G T A T C G A G T C G A C T C G T A
A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

Gata4/MA0482.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TKCWMATCTSCTA
-TCTTATCTCCC-
 A C G T A C T G A G T C C G T A G T C A G T C A C G A T A T G C A C G T A T C G A G T C G A C T C G T A
A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TKCWMATCTSCTA
NNCTTATCTN---
 A C G T A C T G A G T C C G T A G T C A G T C A C G A T A T G C A C G T A T C G A G T C G A C T C G T A
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TKCWMATCTSCTA
NCCTTATCTG---
 A C G T A C T G A G T C C G T A G T C A G T C A C G A T A T G C A C G T A T C G A G T C G A C T C G T A
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TKCWMATCTSCTA---
NNTNANTTCTTATCTCTANANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A G T C A G T C A C G A T A T G C A C G T A T C G A G T C G A C T C G T A A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TKCWMATCTSCTA
-TCTTATCT----
 A C G T A C T G A G T C C G T A G T C A G T C A C G A T A T G C A C G T A T C G A G T C G A C T C G T A
A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TKCWMATCTSCTA
WATGCAAATGAG---
 A C G T A C G T A C G T A C T G A G T C C G T A G T C A G T C A C G A T A T G C A C G T A T C G A G T C G A C T C G T A
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TKCWMATCTSCTA
-YCTTATCTBN--
 A C G T A C T G A G T C C G T A G T C A G T C A C G A T A T G C A C G T A T C G A G T C G A C T C G T A
A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T A C G T