Information for 11-GTCTGACACCTTT (Motif 19)

C T A G A C G T A G T C A C G T A C T G C G T A G T A C C G T A A T G C A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C T G A T C G A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.936
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 33.4bp
Average Position of motif in Background34.0 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GTCTGACACCTTT
CTGTCTGTCACCT--
 A C G T A C G T C T A G A C G T A G T C A C G T A C T G C G T A G T A C C G T A A T G C A G T C A C G T A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGACACCTTT
TGTCTGDCACCT--
 A C G T C T A G A C G T A G T C A C G T A C T G C G T A G T A C C G T A A T G C A G T C A C G T A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GTCTGACACCTTT
---TGACACCT--
 C T A G A C G T A G T C A C G T A C T G C G T A G T A C C G T A A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTCTGACACCTTT
-TTTCACACCTN-
 C T A G A C G T A G T C A C G T A C T G C G T A G T A C C G T A A T G C A G T C A C G T A C G T A C G T
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTCTGACACCTTT--
ATAAATGACACCTATCA
 A C G T A C G T C T A G A C G T A G T C A C G T A C T G C G T A G T A C C G T A A T G C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GTCTGACACCTTT
---TCACACCT--
 C T A G A C G T A G T C A C G T A C T G C G T A G T A C C G T A A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GTCTGACACCTTT
---TCACACCT--
 C T A G A C G T A G T C A C G T A C T G C G T A G T A C C G T A A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GTCTGACACCTTT--
---TGACACCTGTCA
 C T A G A C G T A G T C A C G T A C T G C G T A G T A C C G T A A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

PKNOX1/MA0782.1/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GTCTGACACCTTT--
---TGACACCTGTCA
 C T A G A C G T A G T C A C G T A C T G C G T A G T A C C G T A A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTCTGACACCTTT
-KTTCACACCT--
 C T A G A C G T A G T C A C G T A C T G C G T A G T A C C G T A A T G C A G T C A C G T A C G T A C G T
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T