Information for 9-MMCGYGYGAYCSC (Motif 16)

G T A C G T C A A G T C A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T G C A T C G A G T C
Reverse Opposite:
A C T G T A G C A T C G C T A G A C G T A G T C C T G A A G T C C T A G A G T C A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.812
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.1 +/- 10.8bp
Average Position of motif in Background67.4 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:MMCGYGYGAYCSC
-NCACGTGACN--
 G T A C G T C A A G T C A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T G C A T C G A G T C
A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:MMCGYGYGAYCSC-----
-TGTCGTGACCCCTTAAT
 G T A C G T C A A G T C A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T G C A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:MMCGYGYGAYCSC
GCCACGTGACC--
 G T A C G T C A A G T C A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T G C A T C G A G T C
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:MMCGYGYGAYCSC-----
-NNNNTTGACCCCTNNNN
 G T A C G T C A A G T C A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T G C A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:MMCGYGYGAYCSC
ACCACGTGAC---
 G T A C G T C A A G T C A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T G C A T C G A G T C
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---MMCGYGYGAYCSC
GTTCTCGCGAGANCC-
 A C G T A C G T A C G T G T A C G T C A A G T C A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T G C A T C G A G T C
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:MMCGYGYGAYCSC
RTCATGTGAC---
 G T A C G T C A A G T C A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T G C A T C G A G T C
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:MMCGYGYGAYCSC
-AGGTGTGA----
 G T A C G T C A A G T C A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T G C A T C G A G T C
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:MMCGYGYGAYCSC
-TCACGTGACCGG
 G T A C G T C A A G T C A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T G C A T C G A G T C
A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

Tcfl5/MA0632.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:MMCGYGYGAYCSC
GGCACGTGCC---
 G T A C G T C A A G T C A C T G A G T C A C T G A G C T A C T G C G T A A G T C A T G C A T C G A G T C
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T A C G T