Information for 5-TWTTAACACC (Motif 11)

C G A T C G A T A C G T G A C T C T G A C G T A A T G C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T T A C G A C G T A G C T C T G A G T C A C G T A C G T A
p-value:1e-11
log p-value:-2.683e+01
Information Content per bp:1.799
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif83.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets48.3 +/- 24.5bp
Average Position of motif in Background54.7 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX2/MA0688.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TWTTAACACC--
-TTTCACACCTN
 C G A T C G A T A C G T G A C T C T G A C G T A A T G C C G T A A G T C A G T C A C G T A C G T
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TWTTAACACC-
-ATTAACACCT
 C G A T C G A T A C G T G A C T C T G A C G T A A T G C C G T A A G T C A G T C A C G T
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TWTTAACACC-----
NNTTTTCACACCTTNNN
 A C G T A C G T C G A T C G A T A C G T G A C T C T G A C G T A A T G C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:TWTTAACACC-
---TCACACCT
 C G A T C G A T A C G T G A C T C T G A C G T A A T G C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TWTTAACACC-
-TTTCACACCT
 C G A T C G A T A C G T G A C T C T G A C G T A A T G C C G T A A G T C A G T C A C G T
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TWTTAACACC--
NTTTTCACACCTT
 A C G T C G A T C G A T A C G T G A C T C T G A C G T A A T G C C G T A A G T C A G T C A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TWTTAACACC-
---TGACACCT
 C G A T C G A T A C G T G A C T C T G A C G T A A T G C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TWTTAACACC-
---TCACACCT
 C G A T C G A T A C G T G A C T C T G A C G T A A T G C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TWTTAACACC-
-KTTCACACCT
 C G A T C G A T A C G T G A C T C T G A C G T A A T G C C G T A A G T C A G T C A C G T
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TWTTAACACC--
-CTTCACACCTA
 C G A T C G A T A C G T G A C T C T G A C G T A A T G C C G T A A G T C A G T C A C G T A C G T
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A