Information for 7-TTATGAGATTTAA (Motif 10)

A C G T A G C T C G T A C A G T C T A G C G T A A C T G G T C A A C G T A C G T C A G T C G T A C T G A
Reverse Opposite:
A G C T A C G T G C T A C G T A C G T A A C G T A G T C C G A T A G T C G T C A C G A T C T G A C G T A
p-value:1e-11
log p-value:-2.684e+01
Information Content per bp:1.824
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.4 +/- 30.5bp
Average Position of motif in Background48.3 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGAGATTTAA
NAATTTTACGAGNTNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C A G T C T A G C G T A A C T G G T C A A C G T A C G T C A G T C G T A C T G A
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTATGAGATTTAA
--CNGTGATTTN-
 A C G T A G C T C G T A C A G T C T A G C G T A A C T G G T C A A C G T A C G T C A G T C G T A C T G A
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTATGAGATTTAA
--ATGACCTTGAA
 A C G T A G C T C G T A C A G T C T A G C G T A A C T G G T C A A C G T A C G T C A G T C G T A C T G A
A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGAGATTTAA
ANATTTTACGAGNNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C A G T C T A G C G T A A C T G G T C A A C G T A C G T C A G T C G T A C T G A
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTATGAGATTTAA-
----CGGTTTCAAA
 A C G T A G C T C G T A C A G T C T A G C G T A A C T G G T C A A C G T A C G T C A G T C G T A C T G A A C G T
A C G T A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

PH0124.1_Obox5_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTATGAGATTTAA----
TAGAGGGATTAAATTTC
 A C G T A G C T C G T A C A G T C T A G C G T A A C T G G T C A A C G T A C G T C A G T C G T A C T G A A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TTATGAGATTTAA--
------NATTCAAAT
 A C G T A G C T C G T A C A G T C T A G C G T A A C T G G T C A A C G T A C G T C A G T C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTATGAGATTTAA----
----NTGATTTATGGCC
 A C G T A G C T C G T A C A G T C T A G C G T A A C T G G T C A A C G T A C G T C A G T C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TTATGAGATTTAA
-------ATTAAA
 A C G T A G C T C G T A C A G T C T A G C G T A A C T G G T C A A C G T A C G T C A G T C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TTATGAGATTTAA
GACGATAATGAGCTTGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C A G T C T A G C G T A A C T G G T C A A C G T A C G T C A G T C G T A C T G A
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C A C G T