Information for 1-TAATCYKVTT (Motif 1)

A C G T C G T A C G T A A C G T A G T C A G T C A C G T T G A C C G A T G A C T
Reverse Opposite:
C T G A G C T A A C T G T G C A T C A G A C T G G T C A A C G T A C G T C G T A
p-value:1e-91
log p-value:-2.110e+02
Information Content per bp:1.753
Number of Target Sequences with motif285.0
Percentage of Target Sequences with motif36.40%
Number of Background Sequences with motif4431.4
Percentage of Background Sequences with motif9.48%
Average Position of motif in Targets49.2 +/- 24.0bp
Average Position of motif in Background50.2 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-TAATCYKVTT
CTAATCCTCTT
 A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T T G A C C G A T G A C T
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PH0126.1_Obox6/Jaspar

Match Rank:2
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---TAATCYKVTT--
CNATAATCCGNTTNT
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T T G A C C G A T G A C T A C G T A C G T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.89
Offset:-5
Orientation:reverse strand
Alignment:-----TAATCYKVTT--
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T T G A C C G A T G A C T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.89
Offset:-5
Orientation:reverse strand
Alignment:-----TAATCYKVTT--
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T T G A C C G A T G A C T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-TAATCYKVTT
TTAATCCT---
 A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T T G A C C G A T G A C T
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-TAATCYKVTT
YTAATCCY---
 A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T T G A C C G A T G A C T
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-TAATCYKVTT
TTAATCCG---
 A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T T G A C C G A T G A C T
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--TAATCYKVTT
CCTAATCCGC--
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T T G A C C G A T G A C T
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--TAATCYKVTT
GCTAATCC----
 A C G T A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T T G A C C G A T G A C T
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-TAATCYKVTT
TTAATCCC---
 A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T T G A C C G A T G A C T
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T