Information for 6-AAGATGGCGGCGC (Motif 9)

T C G A C G T A T C A G T C G A C A G T A C T G A C T G A G T C A C T G A T C G G T A C A T C G T A G C
Reverse Opposite:
A T C G T A G C A C T G A T G C T A G C C T A G A G T C A G T C G C T A A G C T A G T C C G A T A G C T
p-value:1e-12
log p-value:-2.887e+01
Information Content per bp:1.746
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif256.0
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets38.2 +/- 25.8bp
Average Position of motif in Background52.5 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-AAGATGGCGGCGC
CAAGATGGCGGC--
 A C G T T C G A C G T A T C A G T C G A C A G T A C T G A C T G A G T C A C T G A T C G G T A C A T C G T A G C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-AAGATGGCGGCGC
CAAGATGGCGGC--
 A C G T T C G A C G T A T C A G T C G A C A G T A C T G A C T G A G T C A C T G A T C G G T A C A T C G T A G C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AAGATGGCGGCGC
-TAATGGCGGNC-
 T C G A C G T A T C A G T C G A C A G T A C T G A C T G A G T C A C T G A T C G G T A C A T C G T A G C
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAGATGGCGGCGC---
NAGANTGGCGGGGNGNA
 A C G T T C G A C G T A T C A G T C G A C A G T A C T G A C T G A G T C A C T G A T C G G T A C A T C G T A G C A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAGATGGCGGCGC
-RGKGGGCGGAGC
 T C G A C G T A T C A G T C G A C A G T A C T G A C T G A G T C A C T G A T C G G T A C A T C G T A G C
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAGATGGCGGCGC
AACAGATGGC-----
 A C G T A C G T T C G A C G T A T C A G T C G A C A G T A C T G A C T G A G T C A C T G A T C G G T A C A T C G T A G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAGATGGCGGCGC-
--GGGGGCGGGGCC
 T C G A C G T A T C A G T C G A C A G T A C T G A C T G A G T C A C T G A T C G G T A C A T C G T A G C A C G T
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AAGATGGCGGCGC
AAGGCCAGATGGTCCGG-
 A C G T A C G T A C G T A C G T A C G T T C G A C G T A T C A G T C G A C A G T A C T G A C T G A G T C A C T G A T C G G T A C A T C G T A G C
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGATGGCGGCGC
GGGNGGGGGCGGGGC
 A C G T A C G T T C G A C G T A T C A G T C G A C A G T A C T G A C T G A G T C A C T G A T C G G T A C A T C G T A G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAGATGGCGGCGC--
-AGGGGGCGGGGCTG
 T C G A C G T A T C A G T C G A C A G T A C T G A C T G A G T C A C T G A T C G G T A C A T C G T A G C A C G T A C G T
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G