Information for 13-CCGCCGGCTGTTA (Motif 15)

A G T C A G T C A C T G A G T C A T G C A C T G A C T G A T G C A C G T A C T G A G C T A C G T C G T A
Reverse Opposite:
A C G T C G T A C T G A A G T C C G T A A T C G A G T C A G T C A T C G A C T G A G T C A C T G A C T G
p-value:1e-8
log p-value:-1.879e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 27.4bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCGCCGGCTGTTA
---CCAGCTGTTN
 A G T C A G T C A C T G A G T C A T G C A C T G A C T G A T G C A C G T A C T G A G C T A C G T C G T A
A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CCGCCGGCTGTTA
-----GGCVGTTR
 A G T C A G T C A C T G A G T C A T G C A C T G A C T G A T G C A C G T A C T G A G C T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCGCCGGCTGTTA
GACCCCCCGCTGTG-
 A C G T A C G T A G T C A G T C A C T G A G T C A T G C A C T G A C T G A T G C A C G T A C T G A G C T A C G T C G T A
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCGCCGGCTGTTA
GACCCCCCGCTGTGC
 A C G T A C G T A G T C A G T C A C T G A G T C A T G C A C T G A C T G A T G C A C G T A C T G A G C T A C G T C G T A
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCGCCGGCTGTTA
GACCCCCCGCTGCGC
 A C G T A C G T A G T C A G T C A C T G A G T C A T G C A C T G A C T G A T G C A C G T A C T G A G C T A C G T C G T A
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCGCCGGCTGTTA
GGCCYCCTGCTGDGH
 A C G T A C G T A G T C A G T C A C T G A G T C A T G C A C T G A C T G A T G C A C G T A C T G A G C T A C G T C G T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCGCCGGCTGTTA
ATTGCCTCAGGCAAT--
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A T G C A C T G A C T G A T G C A C G T A C T G A G C T A C G T C G T A
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCGCCGGCTGTTA
CCCCCTGCTGTG-
 A G T C A G T C A C T G A G T C A T G C A C T G A C T G A T G C A C G T A C T G A G C T A C G T C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCGGCTGTTA
NTNGCCTCAGGCNNN--
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A T G C A C T G A C T G A T G C A C G T A C T G A G C T A C G T C G T A
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCGCCGGCTGTTA
----CAGCTGTT-
 A G T C A G T C A C T G A G T C A T G C A C T G A C T G A T G C A C G T A C T G A G C T A C G T C G T A
A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T