Information for 7-GAGTTGCTGC (Motif 14)

A C T G T G C A A T C G A C G T A G C T A C T G A G T C C G A T A T C G A T G C
Reverse Opposite:
A T C G A T G C C G T A A C T G T G A C T C G A T G C A A T G C A C G T A G T C
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.838
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif264.7
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets48.3 +/- 27.1bp
Average Position of motif in Background54.5 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAGTTGCTGC------
-AGATGCTRCTRCCHT
 A C T G T G C A A T C G A C G T A G C T A C T G A G T C C G A T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGTTGCTGC-
-AGCAGCTGCT
 A C T G T G C A A T C G A C G T A G C T A C T G A G T C C G A T A T C G A T G C A C G T
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GAGTTGCTGC
----NGCTN-
 A C T G T G C A A T C G A C G T A G C T A C T G A G T C C G A T A T C G A T G C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGCTGC---
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C T G T G C A A T C G A C G T A G C T A C T G A G T C C G A T A T C G A T G C A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGTTGCTGC-
-ATTTCCTGTN
 A C T G T G C A A T C G A C G T A G C T A C T G A G T C C G A T A T C G A T G C A C G T
A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAGTTGCTGC-
-----GCTTCC
 A C T G T G C A A T C G A C G T A G C T A C T G A G T C C G A T A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTGCTGC-
NNAGCAGCTGCT
 A C G T A C T G T G C A A T C G A C G T A G C T A C T G A G T C C G A T A T C G A T G C A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGTTGCTGC------
AAATTTGCTGACTTAGA
 A C G T A C T G T G C A A T C G A C G T A G C T A C T G A G T C C G A T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGTTGCTGC-
AATTTGCTGAC
 A C T G T G C A A T C G A C G T A G C T A C T G A G T C C G A T A T C G A T G C A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GAGTTGCTGC-
-----GCTGTG
 A C T G T G C A A T C G A C G T A G C T A C T G A G T C C G A T A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G