Information for 4-AGGTGCCAGCAGC (Motif 6)

C T G A C T A G A C T G C G A T A C T G A T G C A G T C C G T A A C T G A G T C C T G A A C T G A G T C
Reverse Opposite:
A C T G A G T C A G C T A C T G A G T C A C G T A C T G A T C G A G T C C G T A A G T C A G T C A G C T
p-value:1e-12
log p-value:-2.818e+01
Information Content per bp:1.903
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 24.1bp
Average Position of motif in Background47.6 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGTGCCAGCAGC
AGGTGTCA-----
 C T G A C T A G A C T G C G A T A C T G A T G C A G T C C G T A A C T G A G T C C T G A A C T G A G T C
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGGTGCCAGCAGC
--ATGCCAACC--
 C T G A C T A G A C T G C G A T A C T G A T G C A G T C C G T A A C T G A G T C C T G A A C T G A G T C
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:AGGTGCCAGCAGC-
------CAGCTGNT
 C T G A C T A G A C T G C G A T A C T G A T G C A G T C C G T A A C T G A G T C C T G A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AGGTGCCAGCAGC--
-----NCAGCTGCTG
 C T G A C T A G A C T G C G A T A C T G A T G C A G T C C G T A A C T G A G T C C T G A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGTGCCAGCAGC
-CGTGCCAAG---
 C T G A C T A G A C T G C G A T A C T G A T G C A G T C C G T A A C T G A G T C C T G A A C T G A G T C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGGTGCCAGCAGC
-TGAGTCAGCA--
 C T G A C T A G A C T G C G A T A C T G A T G C A G T C C G T A A C T G A G T C C T G A A C T G A G T C
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGGTGCCAGCAGC-
-NGNGACAGCTGCN
 C T G A C T A G A C T G C G A T A C T G A T G C A G T C C G T A A C T G A G T C C T G A A C T G A G T C A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGGTGCCAGCAGC-
--NNVVCAGCTGBN
 C T G A C T A G A C T G C G A T A C T G A T G C A G T C C G T A A C T G A G T C C T G A A C T G A G T C A C G T
A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGGTGCCAGCAGC---
----AGCAGCTGCTNN
 C T G A C T A G A C T G C G A T A C T G A T G C A G T C C G T A A C T G A G T C C T G A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGTGCCAGCAGC-
ADGGYAGYAGCATCT
 A C G T C T G A C T A G A C T G C G A T A C T G A T G C A G T C C G T A A C T G A G T C C T G A A C T G A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T