p-value: | 1e-9 |
log p-value: | -2.088e+01 |
Information Content per bp: | 1.866 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 0.94% |
Number of Background Sequences with motif | 21.8 |
Percentage of Background Sequences with motif | 0.05% |
Average Position of motif in Targets | 50.8 +/- 20.0bp |
Average Position of motif in Background | 60.9 +/- 24.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTTAGACTG --BCAGACWA |
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POL002.1_INR/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCTTAGACTG- ---NNNANTGA |
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TFAP2B(var.2)/MA0812.1/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTTAGACTG TGCCTGAGGCN- |
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TFAP2C(var.2)/MA0814.1/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTTAGACTG NGCCTNAGGCN- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTTAGACTG --CCAGACAG |
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TFAP2A/MA0003.3/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCTTAGACTG CGCCTCAGGCA- |
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ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 7 |
Score: | 0.53 |
Offset: | -9 |
Orientation: | forward strand |
Alignment: | ---------CCTTAGACTG- GAGCCTGGTACTGWGCCTGR |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CCTTAGACTG-- ------GCTGTG |
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MYBL2/MA0777.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTTAGACTG-- AACCGTTAAACGGTC |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTTAGACTG-- --CCAGACRSVB |
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