Information for 9-CCTTAGACTG (Motif 16)

A G T C A T G C C A G T A G C T G T C A A C T G G T C A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T A G T C A C G T T C G A G C T A A T C G A C T G
p-value:1e-9
log p-value:-2.088e+01
Information Content per bp:1.866
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif21.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets50.8 +/- 20.0bp
Average Position of motif in Background60.9 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCTTAGACTG
--BCAGACWA
A G T C A T G C C A G T A G C T G T C A A C T G G T C A A G T C A C G T A C T G
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

POL002.1_INR/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCTTAGACTG-
---NNNANTGA
A G T C A T G C C A G T A G C T G T C A A C T G G T C A A G T C A C G T A C T G A C G T
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAGACTG
TGCCTGAGGCN-
A C G T A C G T A G T C A T G C C A G T A G C T G T C A A C T G G T C A A G T C A C G T A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAGACTG
NGCCTNAGGCN-
A C G T A C G T A G T C A T G C C A G T A G C T G T C A A C T G G T C A A G T C A C G T A C T G
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCTTAGACTG
--CCAGACAG
A G T C A T G C C A G T A G C T G T C A A C T G G T C A A G T C A C G T A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCTTAGACTG
CGCCTCAGGCA-
A C G T A C G T A G T C A T G C C A G T A G C T G T C A A C T G G T C A A G T C A C G T A C T G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:-9
Orientation:forward strand
Alignment:---------CCTTAGACTG-
GAGCCTGGTACTGWGCCTGR
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C C A G T A G C T G T C A A C T G G T C A A G T C A C G T A C T G A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCTTAGACTG--
------GCTGTG
A G T C A T G C C A G T A G C T G T C A A C T G G T C A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

MYBL2/MA0777.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCTTAGACTG--
AACCGTTAAACGGTC
A C G T A C G T A C G T A G T C A T G C C A G T A G C T G T C A A C T G G T C A A G T C A C G T A C T G A C G T A C G T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCTTAGACTG--
--CCAGACRSVB
A G T C A T G C C A G T A G C T G T C A A C T G G T C A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C