Information for 11-KGRYGCCCTCMAG (Motif 13)

A C G T A C T G C T G A A G T C A C T G A G T C A G T C A G T C A C G T A G T C T G C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G C G T A A C T G A C T G C T A G A G T C C T A G A G C T A G T C G T C A
p-value:1e-10
log p-value:-2.343e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.5 +/- 31.1bp
Average Position of motif in Background47.5 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:KGRYGCCCTCMAG
--AGCCACTCAAG
 A C G T A C T G C T G A A G T C A C T G A G T C A G T C A G T C A C G T A G T C T G C A C G T A A C T G
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----KGRYGCCCTCMAG
NNNGGGGCGCCCCCNN-
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A G T C A C T G A G T C A G T C A G T C A C G T A G T C T G C A C G T A A C T G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:KGRYGCCCTCMAG
---NSCACTYVAV
 A C G T A C T G C T G A A G T C A C T G A G T C A G T C A G T C A C G T A G T C T G C A C G T A A C T G
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:KGRYGCCCTCMAG-
--ATGCCCTGAGGC
 A C G T A C T G C T G A A G T C A C T G A G T C A G T C A G T C A C G T A G T C T G C A C G T A A C T G A C G T
A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:KGRYGCCCTCMAG
--AASCACTCAA-
 A C G T A C T G C T G A A G T C A C T G A G T C A G T C A G T C A C G T A G T C T G C A C G T A A C T G
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:KGRYGCCCTCMAG---
--NTGCCCANNGGTNA
 A C G T A C T G C T G A A G T C A C T G A G T C A G T C A G T C A C G T A G T C T G C A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:KGRYGCCCTCMAG
--CTGCCCGCA--
 A C G T A C T G C T G A A G T C A C T G A G T C A G T C A G T C A C G T A G T C T G C A C G T A A C T G
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:KGRYGCCCTCMAG---
---TGCCCTGAGGGCA
 A C G T A C T G C T G A A G T C A C T G A G T C A G T C A G T C A C G T A G T C T G C A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:KGRYGCCCTCMAG-
--WTGSCCTSAGGS
 A C G T A C T G C T G A A G T C A C T G A G T C A G T C A G T C A C G T A G T C T G C A C G T A A C T G A C G T
A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:KGRYGCCCTCMAG
--ATGCCCACC--
 A C G T A C T G C T G A A G T C A C T G A G T C A G T C A G T C A C G T A G T C T G C A C G T A A C T G
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T