Information for 2-CCACCGCGGGAGGTGA (Motif 9)

A T G C A G T C C T G A A G T C A G T C C T A G G T A C C T A G A C T G C T A G C G T A A C T G A T C G A G C T A T C G T C G A
Reverse Opposite:
A C G T A T G C C T G A T A G C A G T C G C A T A G T C A G T C A G T C A C T G A G T C C T A G A C T G A G C T T C A G A T C G
p-value:1e-10
log p-value:-2.427e+01
Information Content per bp:1.744
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif30.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets63.6 +/- 21.2bp
Average Position of motif in Background55.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC4/MA0751.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCACCGCGGGAGGTGA
NCNCAGCGGGGGGTC-
 A T G C A G T C C T G A A G T C A G T C C T A G G T A C C T A G A C T G C T A G C G T A A C T G A T C G A G C T A T C G T C G A
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCACCGCGGGAGGTGA
NCGCAGCGGGGGGTC-
 A T G C A G T C C T G A A G T C A G T C C T A G G T A C C T A G A C T G C T A G C G T A A C T G A T C G A G C T A T C G T C G A
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCACCGCGGGAGGTGA
-CACAGCGGGGGGTC-
 A T G C A G T C C T G A A G T C A G T C C T A G G T A C C T A G A C T G C T A G C G T A A C T G A T C G A G C T A T C G T C G A
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCACCGCGGGAGGTGA
-CTTCGCGGGGGGTC-
 A T G C A G T C C T G A A G T C A G T C C T A G G T A C C T A G A C T G C T A G C G T A A C T G A T C G A G C T A T C G T C G A
A C G T T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCACCGCGGGAGGTGA
---NCGCGGACGTTG-
 A T G C A G T C C T G A A G T C A G T C C T A G G T A C C T A G A C T G C T A G C G T A A C T G A T C G A G C T A T C G T C G A
A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCACCGCGGGAGGTGA
ACCCCCCCGGGGGGN--
 A C G T A T G C A G T C C T G A A G T C A G T C C T A G G T A C C T A G A C T G C T A G C G T A A C T G A T C G A G C T A T C G T C G A
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCACCGCGGGAGGTGA
CCCCCCCGGGGGGGT---
 A C G T A C G T A T G C A G T C C T G A A G T C A G T C C T A G G T A C C T A G A C T G C T A G C G T A A C T G A T C G A G C T A T C G T C G A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCACCGCGGGAGGTGA
----GGCGGGAARN--
 A T G C A G T C C T G A A G T C A G T C C T A G G T A C C T A G A C T G C T A G C G T A A C T G A T C G A G C T A T C G T C G A
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCACCGCGGGAGGTGA
CACCCCCGGGGGGG----
 A C G T A C G T A T G C A G T C C T G A A G T C A G T C C T A G G T A C C T A G A C T G C T A G C G T A A C T G A T C G A G C T A T C G T C G A
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCACCGCGGGAGGTGA
---GGGCGGGAAGG--
 A T G C A G T C C T G A A G T C A G T C C T A G G T A C C T A G A C T G C T A G C G T A A C T G A T C G A G C T A T C G T C G A
A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T