Information for 3-CGAAGGGCAS (Motif 7)

A G T C A C T G C G T A C G T A A T C G A C T G A C T G A T G C C G T A A T C G
Reverse Opposite:
A T G C A C G T A T C G A G T C A G T C A T G C A C G T C G A T A G T C A C T G
p-value:1e-10
log p-value:-2.442e+01
Information Content per bp:1.879
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif49.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets38.5 +/- 26.0bp
Average Position of motif in Background42.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGAAGGGCAS
CAAAGGTCAG
 A G T C A C T G C G T A C G T A A T C G A C T G A C T G A T G C C G T A A T C G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGAAGGGCAS----
NNNNTTGGGCACNNCN
 A C G T A C G T A G T C A C T G C G T A C G T A A T C G A C T G A C T G A T G C C G T A A T C G A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGAAGGGCAS
-TNNGGGCAG
 A G T C A C T G C G T A C G T A A T C G A C T G A C T G A T G C C G T A A T C G
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGAAGGGCAS
--AAGGTCAC
 A G T C A C T G C G T A C G T A A T C G A C T G A C T G A T G C C G T A A T C G
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CGAAGGGCAS
CCGCCCAAGGGCAG
 A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A T C G A C T G A C T G A T G C C G T A A T C G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGAAGGGCAS
TCAAGGTCAN
 A G T C A C T G C G T A C G T A A T C G A C T G A C T G A T G C C G T A A T C G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGAAGGGCAS
-NGTGGGCAT
 A G T C A C T G C G T A C G T A A T C G A C T G A C T G A T G C C G T A A T C G
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGAAGGGCAS
TTGCCCTAGGGCAT
 A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A T C G A C T G A C T G A T G C C G T A A T C G
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGAAGGGCAS
TCACCTCTGGGCAG
 A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A T C G A C T G A C T G A T G C C G T A A T C G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGAAGGGCAS
TGCCCCAGGGCA-
 A C G T A C G T A C G T A G T C A C T G C G T A C G T A A T C G A C T G A C T G A T G C C G T A A T C G
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T