Information for 3-GGCAGGATAATGT (Motif 5)

A C T G A T C G A G T C C G T A A C T G A C T G C G T A A C G T G T C A C G T A A C G T A C T G C G A T
Reverse Opposite:
C G T A G T A C G T C A A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C T G A T G C A G T C
p-value:1e-10
log p-value:-2.463e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 23.6bp
Average Position of motif in Background37.4 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGCAGGATAATGT
---NGGATTAN--
 A C T G A T C G A G T C C G T A A C T G A C T G C G T A A C G T G T C A C G T A A C G T A C T G C G A T
A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCAGGATAATGT
TTGCCCGGATTAGG-
 A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G C G T A A C G T G T C A C G T A A C G T A C T G C G A T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGCAGGATAATGT
---NGGATTAA--
 A C T G A T C G A G T C C G T A A C T G A C T G C G T A A C G T G T C A C G T A A C G T A C T G C G A T
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCAGGATAATGT
AAGATAAGATAACA-
 A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G C G T A A C G T G T C A C G T A A C G T A C T G C G A T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCAGGATAATGT--
TGAACCGGATTAATGAA
 A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G C G T A A C G T G T C A C G T A A C G T A C T G C G A T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCAGGATAATGT--
TGAACCGGATTAATGAA
 A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G C G T A A C G T G T C A C G T A A C G T A C T G C G A T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCAGGATAATGT
NDCAGGAARTNN-
 A C T G A T C G A G T C C G T A A C T G A C T G C G T A A C G T G T C A C G T A A C G T A C T G C G A T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T

GATA5/MA0766.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGCAGGATAATGT
----AGATAAGA-
 A C T G A T C G A G T C C G T A A C T G A C T G C G T A A C G T G T C A C G T A A C G T A C T G C G A T
A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGCAGGATAATGT
BTKGGCGGGAAA----
 A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G C G T A A C G T G T C A C G T A A C G T A C T G C G A T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGCAGGATAATGT
ANCAGGATGT---
 A C T G A T C G A G T C C G T A A C T G A C T G C G T A A C G T G T C A C G T A A C G T A C T G C G A T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T