Information for 5-GAGGGCCTCG (Motif 19)

C A T G C T G A C T A G A C T G A T C G A T G C G T A C A C G T A G T C T A C G
Reverse Opposite:
A T G C T C A G T G C A C A T G T A C G A T G C A G T C A G T C G A C T G T A C
p-value:1e-7
log p-value:-1.734e+01
Information Content per bp:1.818
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.14%
Number of Background Sequences with motif453.1
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets41.5 +/- 21.9bp
Average Position of motif in Background50.5 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GAGGGCCTCG
--AGGCCTAG
 C A T G C T G A C T A G A C T G A T C G A T G C G T A C A C G T A G T C T A C G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAGGGCCTCG
--AGGCCTNG
 C A T G C T G A C T A G A C T G A T C G A T G C G T A C A C G T A G T C T A C G
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGCCTCG
NRRGGGTCTT-
 A C G T C A T G C T G A C T A G A C T G A T C G A T G C G T A C A C G T A G T C T A C G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGGGCCTCG
GTGGGCCCCA
 C A T G C T G A C T A G A C T G A T C G A T G C G T A C A C G T A G T C T A C G
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

Klf12/MA0742.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGCCTCG--
NANAAGGGCGTGGTC
 A C G T A C G T A C G T C A T G C T G A C T A G A C T G A T C G A T G C G T A C A C G T A G T C T A C G A C G T A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGGGCCTCG-----
-CAGGCCNNGGCCNN
 C A T G C T G A C T A G A C T G A T C G A T G C G T A C A C G T A G T C T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GAGGGCCTCG--
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C G T C A T G C T G A C T A G A C T G A T C G A T G C G T A C A C G T A G T C T A C G A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGCCTCG
CTTGAGTGGCT--
 A C G T A C G T A C G T C A T G C T G A C T A G A C T G A T C G A T G C G T A C A C G T A G T C T A C G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCCTCG--
AAGGGGGCGTGGCC
 A C G T A C G T C A T G C T G A C T A G A C T G A T C G A T G C G T A C A C G T A G T C T A C G A C G T A C G T
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCCTCG
TTGAGTGSTT--
 A C G T A C G T C A T G C T G A C T A G A C T G A T C G A T G C G T A C A C G T A G T C T A C G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T