p-value: | 1e-10 |
log p-value: | -2.383e+01 |
Information Content per bp: | 1.791 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.65% |
Number of Background Sequences with motif | 3.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 59.2 +/- 16.5bp |
Average Position of motif in Background | 40.3 +/- 32.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | AAGGCACGHGGTCTGG --------CTGTCTGG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | AAGGCACGHGGTCTGG ------VBSYGTCTGG |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | AAGGCACGHGGTCTGG--- ---------GGTCTGGCAT |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAGGCACGHGGTCTGG AAGGCAAGTGT----- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AAGGCACGHGGTCTGG----- ----NNTNNTGTCTGGNNTNG |
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MAX::MYC/MA0059.1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAGGCACGHGGTCTGG -GACCACGTGGT---- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | AAGGCACGHGGTCTGG --------TWGTCTGV |
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PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAGGCACGHGGTCTGG --GTCACGCTCNCTGA |
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TBX15/MA0803.1/Jaspar
Match Rank: | 9 |
Score: | 0.51 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | AAGGCACGHGGTCTGG --------AGGTGTGA |
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ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AAGGCACGHGGTCTGG--- YCAGGCWCAGTACCAGGCTC |
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