Information for 4-TGGGTGGCSTGCKCTC (Motif 11)

A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A T C G A C G T C A T G A G T C A C G T A G T C A C G T T A G C
Reverse Opposite:
A C T G C G T A A C T G G T C A T C A G G A T C T C G A T A G C A C T G A G T C A G T C G T C A A G T C A G T C A G T C C G T A
p-value:1e-8
log p-value:-1.950e+01
Information Content per bp:1.776
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 19.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGGGTGGCSTGCKCTC
CGTGGGTGGTCC------
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A T C G A C G T C A T G A G T C A C G T A G T C A C G T T A G C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGGTGGCSTGCKCTC--
NNNGGGHAGCAHRTGCTRCC
 A C G T A C G T A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A T C G A C G T C A T G A G T C A C G T A G T C A C G T T A G C A C G T A C G T
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C

ZNF740/MA0753.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTGGCSTGCKCTC
GTGGGGGGGG-------
 A C G T A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A T C G A C G T C A T G A G T C A C G T A G T C A C G T T A G C
C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGGGTGGCSTGCKCTC
NGCGTGGGCGGR--------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A T C G A C G T C A T G A G T C A C G T A G T C A C G T T A G C
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGTGGCSTGCKCTC
ATTTTNGGGGGGCNN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A T C G A C G T C A T G A G T C A C G T A G T C A C G T T A G C
T C G A C A G T G C A T C G A T C G A T C G A T C A T G C T A G A C T G A C T G A C T G A T C G A G T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTGGCSTGCKCTC
NNNAAGGGGGCGGGNNN--
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A T C G A C G T C A T G A G T C A C G T A G T C A C G T T A G C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGGGTGGCSTGCKCTC
GTATTGGGTGGGTAATT---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A T C G A C G T C A T G A G T C A C G T A G T C A C G T T A G C
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTGGCSTGCKCTC
NGTAGGTTGGCATNNN---
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A T C G A C G T C A T G A G T C A C G T A G T C A C G T T A G C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T

PB0100.1_Zfp740_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGGGTGGCSTGCKCTC
NANNTGGGGGGGGNGN----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A T C G A C G T C A T G A G T C A C G T A G T C A C G T T A G C
T A G C C T G A C G T A C A T G C A G T C A T G C A T G C A T G C A T G C A T G C A T G A C T G A C T G C T A G A T C G C T A G A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGGGTGGCSTGCKCTC
TGGGTGGGGC------
 A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A T C G A C G T C A T G A G T C A C G T A G T C A C G T T A G C
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T