Information for 8-CTCCTGSCAGCCMCWK (Motif 7)

A G T C A C G T A G T C A G T C A C G T A C T G A T G C A G T C G T C A A T C G G T A C A G T C G T A C A G T C C G A T A C T G
Reverse Opposite:
G T A C C G T A A C T G A C T G A C T G A C T G A T G C A C G T A C T G A T C G A G T C C G T A A C T G A C T G C G T A A C T G
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 20.5bp
Average Position of motif in Background33.6 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCCTGSCAGCCMCWK
--CTTGGCAA------
 A G T C A C G T A G T C A G T C A C G T A C T G A T G C A G T C G T C A A T C G G T A C A G T C G T A C A G T C C G A T A C T G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCCTGSCAGCCMCWK
--VBTGWCAGCB----
 A G T C A C G T A G T C A G T C A C G T A C T G A T G C A G T C G T C A A T C G G T A C A G T C G T A C A G T C C G A T A C T G
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCCTGSCAGCCMCWK
NNCACCTGNN--------
 A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C A G T C G T C A A T C G G T A C A G T C G T A C A G T C C G A T A C T G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCCTGSCAGCCMCWK
--SCTGTCARCACC--
 A G T C A C G T A G T C A G T C A C G T A C T G A T G C A G T C G T C A A T C G G T A C A G T C G T A C A G T C C G A T A C T G
A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTCCTGSCAGCCMCWK
---ATGCCAACC----
 A G T C A C G T A G T C A G T C A C G T A C T G A T G C A G T C G T C A A T C G G T A C A G T C G T A C A G T C C G A T A C T G
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTCCTGSCAGCCMCWK
CGCCCCCTGACA-------
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C A G T C G T C A A T C G G T A C A G T C G T A C A G T C C G A T A C T G
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCCTGSCAGCCMCWK
TACACCTGTC--------
 A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C A G T C G T C A A T C G G T A C A G T C G T A C A G T C C G A T A C T G
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTCCTGSCAGCCMCWK
SNGCACCTGCHS-------
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G A T G C A G T C G T C A A T C G G T A C A G T C G T A C A G T C C G A T A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTCCTGSCAGCCMCWK
--SCTGTCAVTCAV--
 A G T C A C G T A G T C A G T C A C G T A C T G A T G C A G T C G T C A A T C G G T A C A G T C G T A C A G T C C G A T A C T G
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTCCTGSCAGCCMCWK---
---ATCCCCGCCCCTAAAA
 A G T C A C G T A G T C A G T C A C G T A C T G A T G C A G T C G T C A A T C G G T A C A G T C G T A C A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A