Information for 1-CCGGCCTCCG (Motif 5)

A G T C A T G C C T A G A T C G T A G C A G T C A G C T A G T C T G A C A T C G
Reverse Opposite:
T A G C A C T G T C A G T C G A A C T G A T C G T A G C G A T C T A C G T C A G
p-value:1e-11
log p-value:-2.733e+01
Information Content per bp:1.689
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif8.31%
Number of Background Sequences with motif1261.6
Percentage of Background Sequences with motif2.67%
Average Position of motif in Targets53.0 +/- 24.0bp
Average Position of motif in Background50.6 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CCGGCCTCCG
----GCTCCG
 A G T C A T G C C T A G A T C G T A G C A G T C A G C T A G T C T G A C A T C G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCGGCCTCCG
CNAGGCCT---
 A C G T A G T C A T G C C T A G A T C G T A G C A G T C A G C T A G T C T G A C A T C G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CCGGCCTCCG
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C C T A G A T C G T A G C A G T C A G C T A G T C T G A C A T C G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCGGCCTCCG
-AGGCCTAG-
 A G T C A T G C C T A G A T C G T A G C A G T C A G C T A G T C T G A C A T C G
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCGGCCTCCG
CNGTCCTCCC
 A G T C A T G C C T A G A T C G T A G C A G T C A G C T A G T C T G A C A T C G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCCTCCG
GCTCGGSCTC--
 A C G T A C G T A G T C A T G C C T A G A T C G T A G C A G T C A G C T A G T C T G A C A T C G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCGGCCTCCG--
--NACTTCCGGT
 A G T C A T G C C T A G A T C G T A G C A G T C A G C T A G T C T G A C A T C G A C G T A C G T
A C G T A C G T G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T

ZBTB7B/MA0694.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCGGCCTCCG--
GCGACCACCGAA
 A G T C A T G C C T A G A T C G T A G C A G T C A G C T A G T C T G A C A T C G A C G T A C G T
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCGGCCTCCG---
GCCCCGCCCCCTCCC
 A C G T A C G T A G T C A T G C C T A G A T C G T A G C A G T C A G C T A G T C T G A C A T C G A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCGGCCTCCG---
-CAACGTCCGCGG
 A G T C A T G C C T A G A T C G T A G C A G T C A G C T A G T C T G A C A T C G A C G T A C G T A C G T
A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G