Information for 21-CGCGCCGCGC (Motif 46)

A T G C T A C G A T G C C T A G A T G C A T G C T A C G T A G C A T C G T A G C
Reverse Opposite:
A T C G T A G C A T C G A T G C T A C G A T C G G A T C T A C G A T G C T A C G
p-value:1e-2
log p-value:-4.856e+00
Information Content per bp:1.564
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif129.0
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets68.7 +/- 12.9bp
Average Position of motif in Background48.1 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CGCGCCGCGC--
GCCGCGCAGTGCGT
 A C G T A C G T A T G C T A C G A T G C C T A G A T G C A T G C T A C G T A G C A T C G T A G C A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CGCGCCGCGC
AGCGCGCC----
 A C G T A C G T A T G C T A C G A T G C C T A G A T G C A T G C T A C G T A G C A T C G T A G C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGCGCCGCGC--
GGCCCCGCCCCC
 A T G C T A C G A T G C C T A G A T G C A T G C T A C G T A G C A T C G T A G C A C G T A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CGCGCCGCGC-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A C G A T G C C T A G A T G C A T G C T A C G T A G C A T C G T A G C A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGCGCCGCGC
-GCTCCG---
 A T G C T A C G A T G C C T A G A T G C A T G C T A C G T A G C A T C G T A G C
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGCGCCGCGC---
-GCTCCGCCCMCY
 A T G C T A C G A T G C C T A G A T G C A T G C T A C G T A G C A T C G T A G C A C G T A C G T A C G T
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CGCGCCGCGC-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A C G A T G C C T A G A T G C A T G C T A C G T A G C A T C G T A G C A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CGCGCCGCGC--
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A T G C T A C G A T G C C T A G A T G C A T G C T A C G T A G C A T C G T A G C A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CGCGCCGCGC
DTTTCCCGCC----
 A C G T A C G T A C G T A C G T A T G C T A C G A T G C C T A G A T G C A T G C T A C G T A G C A T C G T A G C
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGCGCCGCGC
TTTCCCGCCMAV-
 A C G T A C G T A C G T A T G C T A C G A T G C C T A G A T G C A T G C T A C G T A G C A T C G T A G C
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T