Information for 20-GCACMSRCMCGGG (Motif 43)

A C T G A G T C C G T A A G T C G T A C A T C G C T G A A G T C G T C A G T A C A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C T G A C G T A C T G A G C T A T G C A C T G A C T G A C G T A C T G A G T C
p-value:1e-4
log p-value:-9.992e+00
Information Content per bp:1.876
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets76.0 +/- 19.2bp
Average Position of motif in Background35.4 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCACMSRCMCGGG
AGCGGCACACACGCAA-
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C G T A C A T C G C T G A A G T C G T C A G T A C A C T G A C T G A C T G
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCACMSRCMCGGG---
--ACATGCCCGGGCAT
 A C T G A G T C C G T A A G T C G T A C A T C G C T G A A G T C G T C A G T A C A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCACMSRCMCGGG----
--NCCCCCCCGGGGGGN
 A C T G A G T C C G T A A G T C G T A C A T C G C T G A A G T C G T C A G T A C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCACMSRCMCGGG----
--ACCCCCCCGGGGGGN
 A C T G A G T C C G T A A G T C G T A C A T C G C T G A A G T C G T C A G T A C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCACMSRCMCGGG
SNGCACCTGCHS---
 A C G T A C G T A C T G A G T C C G T A A G T C G T A C A T C G C T G A A G T C G T C A G T A C A C T G A C T G A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCACMSRCMCGGG--
-----GGCACGCGTC
 A C T G A G T C C G T A A G T C G T A C A T C G C T G A A G T C G T C A G T A C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCACMSRCMCGGG
-CRCCCACGCA--
 A C T G A G T C C G T A A G T C G T A C A T C G C T G A A G T C G T C A G T A C A C T G A C T G A C T G
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCACMSRCMCGGG--
-----GACACGTGCC
 A C T G A G T C C G T A A G T C G T A C A T C G C T G A A G T C G T C A G T A C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCACMSRCMCGGG----
---CCCCCCCGGGGGNN
 A C T G A G T C C G T A A G T C G T A C A T C G C T G A A G T C G T C A G T A C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

Tcfl5/MA0632.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCACMSRCMCGGG--
-----GGCACGTGCC
 A C T G A G T C C G T A A G T C G T A C A T C G C T G A A G T C G T C A G T A C A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C