Information for 19-CAGTGATTCGGGC (Motif 40)

A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A C T G C G T A C G T A A C G T A G T C C G T A A G T C A C G T A C T G
p-value:1e-5
log p-value:-1.271e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.3 +/- 14.8bp
Average Position of motif in Background37.3 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAGTGATTCGGGC
CNGTGATTTN---
 A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C T G A C T G A C T G A G T C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGATTCGGGC
GCAGTGATTT----
 A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C T G A C T G A C T G A G T C
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGATTCGGGC
NNNNTGCCAGTGATTG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C T G A C T G A C T G A G T C
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGATTCGGGC
TGCTGTGATTT----
 A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C T G A C T G A C T G A G T C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGTGATTCGGGC----
-NNNNATGCGGGTNNNN
 A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CAGTGATTCGGGC-
----TATGCGGGTA
 A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CAGTGATTCGGGC--
------TNNGGGCAG
 A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGTGATTCGGGC-
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C T G A C T G A C T G A G T C A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

FOSL1/MA0477.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGTGATTCGGGC
-GGTGACTCATG-
 A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C T G A C T G A C T G A G T C
A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGTGATTCGGGC
-ATTGATTYND--
 A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A G T C A C T G A C T G A C T G A G T C
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T