Information for 2-TGCGGDGSCCHGCCTG (Motif 4)

G C A T C T A G G T A C C T A G T A C G C A G T C T A G T A C G A T G C A G T C G C A T A T C G G T A C T A G C C G A T A T C G
Reverse Opposite:
T A G C C G T A A T C G C A T G T A G C C G T A T C A G T A C G A T G C G A T C G C T A A T G C G A T C C A T G A G T C C G T A
p-value:1e-11
log p-value:-2.742e+01
Information Content per bp:1.656
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif32.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets45.8 +/- 24.9bp
Average Position of motif in Background46.6 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGGDGSCCHGCCTG
NNNANTGCAGTGCNNTT----
 A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C C T A G T A C G C A G T C T A G T A C G A T G C A G T C G C A T A T C G G T A C T A G C C G A T A T C G
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TGCGGDGSCCHGCCTG-
---------CTGTCTGG
 G C A T C T A G G T A C C T A G T A C G C A G T C T A G T A C G A T G C A G T C G C A T A T C G G T A C T A G C C G A T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TGCGGDGSCCHGCCTG-
-------VBSYGTCTGG
 G C A T C T A G G T A C C T A G T A C G C A G T C T A G T A C G A T G C A G T C G C A T A T C G G T A C T A G C C G A T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TGCGGDGSCCHGCCTG---
----GGGGCTYGKCTGGGA
 G C A T C T A G G T A C C T A G T A C G C A G T C T A G T A C G A T G C A G T C G C A T A T C G G T A C T A G C C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TGCGGDGSCCHGCCTG-----
------GGNGCGNCTGTTNNN
 G C A T C T A G G T A C C T A G T A C G C A G T C T A G T A C G A T G C A G T C G C A T A T C G G T A C T A G C C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:forward strand
Alignment:TGCGGDGSCCHGCCTG
--GGGGCCGAGGCCTG
 G C A T C T A G G T A C C T A G T A C G C A G T C T A G T A C G A T G C A G T C G C A T A T C G G T A C T A G C C G A T A T C G
A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TGCGGDGSCCHGCCTG
-----NNACTTGCCTT
 G C A T C T A G G T A C C T A G T A C G C A G T C T A G T A C G A T G C A G T C G C A T A T C G G T A C T A G C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.48
Offset:10
Orientation:forward strand
Alignment:TGCGGDGSCCHGCCTG
----------TGCGTG
 G C A T C T A G G T A C C T A G T A C G C A G T C T A G T A C G A T G C A G T C G C A T A T C G G T A C T A G C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.48
Offset:9
Orientation:forward strand
Alignment:TGCGGDGSCCHGCCTG-
---------TWGTCTGV
 G C A T C T A G G T A C C T A G T A C G C A G T C T A G T A C G A T G C A G T C G C A T A T C G G T A C T A G C C G A T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

GCM1/MA0646.1/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--TGCGGDGSCCHGCCTG
CATGCGGGTAC-------
 A C G T A C G T G C A T C T A G G T A C C T A G T A C G C A G T C T A G T A C G A T G C A G T C G C A T A T C G G T A C T A G C C G A T A T C G
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T