Information for 15-CTAGCTGTGCGTT (Motif 35)

A G T C A C G T C G T A A C T G A G T C A C G T A C T G A C G T A T C G A G T C A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C T G A T G C C G T A G T A C C G T A A C T G A G T C C G A T C G T A A C T G
p-value:1e-6
log p-value:-1.478e+01
Information Content per bp:1.940
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.5 +/- 19.5bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTAGCTGTGCGTT
---GCTGTG----
 A G T C A C G T C G T A A C T G A G T C A C G T A C T G A C G T A T C G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTAGCTGTGCGTT
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C A C G T A C T G A C G T A T C G A G T C A C T G A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTAGCTGTGCGTT
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C A C G T A C T G A C G T A T C G A G T C A C T G A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTAGCTGTGCGTT
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C A C G T A C T G A C G T A T C G A G T C A C T G A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTAGCTGTGCGTT
CCAGCTGTTN---
 A G T C A C G T C G T A A C T G A G T C A C G T A C T G A C G T A T C G A G T C A C T G A C G T A C G T
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTAGCTGTGCGTT
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C A C G T A C T G A C G T A T C G A G T C A C T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTAGCTGTGCGTT
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C A C G T A C T G A C G T A T C G A G T C A C T G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTAGCTGTGCGTT
CCTGCTGAGH---
 A G T C A C G T C G T A A C T G A G T C A C G T A C T G A C G T A T C G A G T C A C T G A C G T A C G T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTAGCTGTGCGTT
--TGCTGTGATTT
 A G T C A C G T C G T A A C T G A G T C A C G T A C T G A C G T A T C G A G T C A C T G A C G T A C G T
A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTAGCTGTGCGTT
-CAGCTGTT----
 A G T C A C G T C G T A A C T G A G T C A C G T A C T G A C G T A T C G A G T C A C T G A C G T A C G T
A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T