Information for 2-CAGTGGCAGGTGA (Motif 3)

A G T C G C T A C T A G C G A T C A T G A T C G T G A C C G T A C T A G A T C G C A G T A T C G C T G A
Reverse Opposite:
A G C T A T G C G C T A T A G C G A T C C G A T A C T G A T G C G A T C C G T A A G T C C G A T A C T G
p-value:1e-11
log p-value:-2.744e+01
Information Content per bp:1.756
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif69.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets50.4 +/- 24.5bp
Average Position of motif in Background44.7 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CAGTGGCAGGTGA-
----NNCAGGTGNN
 A G T C G C T A C T A G C G A T C A T G A T C G T G A C C G T A C T A G A T C G C A G T A T C G C T G A A C G T
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CAGTGGCAGGTGA--
---SDGCAGGTGCNS
 A G T C G C T A C T A G C G A T C A T G A T C G T G A C C G T A C T A G A T C G C A G T A T C G C T G A A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CAGTGGCAGGTGA
----AACAGGTGT
 A G T C G C T A C T A G C G A T C A T G A T C G T G A C C G T A C T A G A T C G C A G T A T C G C T G A
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CAGTGGCAGGTGA-
----GACAGGTGTN
 A G T C G C T A C T A G C G A T C A T G A T C G T G A C C G T A C T A G A T C G C A G T A T C G C T G A A C G T
A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAGTGGCAGGTGA----
NNNNAGCAGCTGCTGAN
 A G T C G C T A C T A G C G A T C A T G A T C G T G A C C G T A C T A G A T C G C A G T A T C G C T G A A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CAGTGGCAGGTGA--
------CAGGTGAGG
 A G T C G C T A C T A G C G A T C A T G A T C G T G A C C G T A C T A G A T C G C A G T A T C G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CAGTGGCAGGTGA-
----NNCAGGTGCG
 A G T C G C T A C T A G C G A T C A T G A T C G T G A C C G T A C T A G A T C G C A G T A T C G C T G A A C G T
A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CAGTGGCAGGTGA-
----NNCAGGTGTN
 A G T C G C T A C T A G C G A T C A T G A T C G T G A C C G T A C T A G A T C G C A G T A T C G C T G A A C G T
A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGTGGCAGGTGA-
-NGNGACAGCTGCN
 A G T C G C T A C T A G C G A T C A T G A T C G T G A C C G T A C T A G A T C G C A G T A T C G C T G A A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAGTGGCAGGTGA
---TGGCAGTTGN
 A G T C G C T A C T A G C G A T C A T G A T C G T G A C C G T A C T A G A T C G C A G T A T C G C T G A
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G