Information for 13-GCCTGTAGGCAACAGG (Motif 23)

C T A G A T G C A G T C G A C T C A T G C A G T C T G A C A T G A T C G T G A C G T C A C T G A G T A C C G T A A C T G A T C G
Reverse Opposite:
A T G C G T A C C G A T A C T G A G C T C A G T A C T G A T G C G A T C A G C T G C T A G A T C C G T A T A C G T A C G A G T C
p-value:1e-8
log p-value:-1.890e+01
Information Content per bp:1.631
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif112.9
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets43.7 +/- 22.5bp
Average Position of motif in Background53.5 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GCCTGTAGGCAACAGG---
------ATGCAACAGGTGG
 C T A G A T G C A G T C G A C T C A T G C A G T C T G A C A T G A T C G T G A C G T C A C T G A G T A C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGTAGGCAACAGG
TGCCCNGGGGCA-----
 A C G T C T A G A T G C A G T C G A C T C A T G C A G T C T G A C A T G A T C G T G A C G T C A C T G A G T A C C G T A A C T G A T C G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GCCTGTAGGCAACAGG-----
------GAGCAACAGGTGGTT
 C T A G A T G C A G T C G A C T C A T G C A G T C T G A C A T G A T C G T G A C G T C A C T G A G T A C C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCTGTAGGCAACAGG
TTGCCCTAGGGCAT----
 A C G T A C G T C T A G A T G C A G T C G A C T C A T G C A G T C T G A C A T G A T C G T G A C G T C A C T G A G T A C C G T A A C T G A T C G
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGTAGGCAACAGG
TGCCCTNGGGCA-----
 A C G T C T A G A T G C A G T C G A C T C A T G C A G T C T G A C A T G A T C G T G A C G T C A C T G A G T A C C G T A A C T G A T C G
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCCTGTAGGCAACAGG---
----GTAGGGCAAAGGTCA
 C T A G A T G C A G T C G A C T C A T G C A G T C T G A C A T G A T C G T G A C G T C A C T G A G T A C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGTAGGCAACAGG
TGCCCTNGGGCA-----
 A C G T C T A G A T G C A G T C G A C T C A T G C A G T C T G A C A T G A T C G T G A C G T C A C T G A G T A C C G T A A C T G A T C G
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCCTGTAGGCAACAGG---
-----TAGGGCAAAGGTCA
 C T A G A T G C A G T C G A C T C A T G C A G T C T G A C A T G A T C G T G A C G T C A C T G A G T A C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCCTGTAGGCAACAGG---
-----TGGGGCAAAGGTCA
 C T A G A T G C A G T C G A C T C A T G C A G T C T G A C A T G A T C G T G A C G T C A C T G A G T A C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCCTGTAGGCAACAGG
CCGCCCAAGGGCAG----
 A C G T A C G T C T A G A T G C A G T C G A C T C A T G C A G T C T G A C A T G A T C G T G A C G T C A C T G A G T A C C G T A A C T G A T C G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T