Information for 1-BCAGGCTCKGCCG (Motif 2)

A G T C A G T C T C G A A C T G A C T G G T A C A G C T A T G C A C T G A C T G A G T C T A G C T A C G
Reverse Opposite:
A T G C A T C G A C T G G T A C G T A C A T C G C T G A A C T G A G T C A G T C A G C T A C T G T A C G
p-value:1e-12
log p-value:-2.800e+01
Information Content per bp:1.776
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif81.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets50.2 +/- 21.9bp
Average Position of motif in Background54.1 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:BCAGGCTCKGCCG-
----GCTCGGSCTC
 A G T C A G T C T C G A A C T G A C T G G T A C A G C T A T G C A C T G A C T G A G T C T A G C T A C G A C G T
A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:BCAGGCTCKGCCG
---NGCTN-----
 A G T C A G T C T C G A A C T G A C T G G T A C A G C T A T G C A C T G A C T G A G T C T A G C T A C G
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:BCAGGCTCKGCCG---
----GCTCCGCCCMCY
 A G T C A G T C T C G A A C T G A C T G G T A C A G C T A T G C A C T G A C T G A G T C T A G C T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:BCAGGCTCKGCCG-------
YCAGGCWCAGTACCAGGCTC
 A G T C A G T C T C G A A C T G A C T G G T A C A G C T A T G C A C T G A C T G A G T C T A G C T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:BCAGGCTCKGCCG--
---GGCCCCGCCCCC
 A G T C A G T C T C G A A C T G A C T G G T A C A G C T A T G C A C T G A C T G A G T C T A G C T A C G A C G T A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:BCAGGCTCKGCCG--
-CAGGCCNNGGCCNN
 A G T C A G T C T C G A A C T G A C T G G T A C A G C T A T G C A C T G A C T G A G T C T A G C T A C G A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:BCAGGCTCKGCCG
----GCTCCG---
 A G T C A G T C T C G A A C T G A C T G G T A C A G C T A T G C A C T G A C T G A G T C T A G C T A C G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:BCAGGCTCKGCCG---
--NAGCCCCGCCCCCN
 A G T C A G T C T C G A A C T G A C T G G T A C A G C T A T G C A C T G A C T G A G T C T A G C T A C G A C G T A C G T A C G T
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--BCAGGCTCKGCCG
NNTCCTGCTGTGNNN
 A C G T A C G T A G T C A G T C T C G A A C T G A C T G G T A C A G C T A T G C A C T G A C T G A G T C T A G C T A C G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--BCAGGCTCKGCCG
TCNCCTGCTGNGNNN
 A C G T A C G T A G T C A G T C T C G A A C T G A C T G G T A C A G C T A T G C A C T G A C T G A G T C T A G C T A C G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G