p-value: | 1e-8 |
log p-value: | -2.050e+01 |
Information Content per bp: | 1.935 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.64% |
Number of Background Sequences with motif | 1.4 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 51.2 +/- 21.1bp |
Average Position of motif in Background | 49.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.50 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CGACCCTGACCTGACT TGACCTTGACCT---- |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CGACCCTGACCTGACT TGACCTTGACCT---- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CGACCCTGACCTGACT ------TGACCTYA-- |
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ZEB1/MA0103.2/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CGACCCTGACCTGACT ----CCTCACCTG--- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CGACCCTGACCTGACT ------TGACCT---- |
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CRE(bZIP)/Promoter/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CGACCCTGACCTGACT ---CGGTGACGTCAC- |
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PB0157.1_Rara_2/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CGACCCTGACCTGACT-- --NNCNTGACCCCGCTCT |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CGACCCTGACCTGACT ------TGACCTARTT |
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RORA/MA0071.1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CGACCCTGACCTGACT ------TGACCTTGAT |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CGACCCTGACCTGACT-- --NNNNTGACCCGGCGCG |
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