Information for 5-TGKTAATKCGGGA (Motif 18)

A C G T A C T G A C T G C G A T C G T A G T C A A G C T C A T G G T A C C A T G C T A G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C G A T C A C T G G T A C C T G A A C G T C G A T C G T A G T A C A G T C C G T A
p-value:1e-8
log p-value:-2.050e+01
Information Content per bp:1.767
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 21.3bp
Average Position of motif in Background78.5 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGKTAATKCGGGA
TATGCWAATBAV---
 A C G T A C G T A C G T A C T G A C T G C G A T C G T A G T C A A G C T C A T G G T A C C A T G C T A G A T C G C G T A
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGKTAATKCGGGA
AGGTGTTAAT------
 A C G T A C G T A C G T A C G T A C T G A C T G C G A T C G T A G T C A A G C T C A T G G T A C C A T G C T A G A T C G C G T A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGKTAATKCGGGA
WATGCAAATGAG---
 A C G T A C G T A C G T A C T G A C T G C G A T C G T A G T C A A G C T C A T G G T A C C A T G C T A G A T C G C G T A
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGKTAATKCGGGA
TTGTTTAC------
 A C G T A C G T A C T G A C T G C G A T C G T A G T C A A G C T C A T G G T A C C A T G C T A G A T C G C G T A
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGKTAATKCGGGA
TATGCAAAT------
 A C G T A C G T A C G T A C T G A C T G C G A T C G T A G T C A A G C T C A T G G T A C C A T G C T A G A T C G C G T A
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGKTAATKCGGGA
TTATGCAAATTA----
 A C G T A C G T A C G T A C G T A C T G A C T G C G A T C G T A G T C A A G C T C A T G G T A C C A T G C T A G A T C G C G T A
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TGKTAATKCGGGA---
--CAAATTCCGGAACC
 A C G T A C T G A C T G C G A T C G T A G T C A A G C T C A T G G T A C C A T G C T A G A T C G C G T A A C G T A C G T A C G T
A C G T A C G T G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGKTAATKCGGGA----
-NNNNATGCGGGTNNNN
 A C G T A C T G A C T G C G A T C G T A G T C A A G C T C A T G G T A C C A T G C T A G A T C G C G T A A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGKTAATKCGGGA
TGTTTAC------
 A C G T A C T G A C T G C G A T C G T A G T C A A G C T C A T G G T A C C A T G C T A G A T C G C G T A
A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGKTAATKCGGGA
TGTTTAC------
 A C G T A C T G A C T G C G A T C G T A G T C A A G C T C A T G G T A C C A T G C T A G A T C G C G T A
C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T