Information for 4-AACCAGGCCAAGG (Motif 17)

C T G A T G C A A G T C G T A C C G T A C T A G A C T G G T A C A G T C G T C A C G T A A C T G A C T G
Reverse Opposite:
G T A C A G T C A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C T G A C G T A G C T
p-value:1e-9
log p-value:-2.077e+01
Information Content per bp:1.864
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif22.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.2 +/- 17.3bp
Average Position of motif in Background46.0 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AACCAGGCCAAGG
--CAAGGHCANV-
 C T G A T G C A A G T C G T A C C G T A C T A G A C T G G T A C A G T C G T C A C G T A A C T G A C T G
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AACCAGGCCAAGG----
---CAGGCCNNGGCCNN
 C T G A T G C A A G T C G T A C C G T A C T A G A C T G G T A C A G T C G T C A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:AACCAGGCCAAGG---
----AGGTCAAGGTCA
 C T G A T G C A A G T C G T A C C G T A C T A G A C T G G T A C A G T C G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:AACCAGGCCAAGG
-----TGCCAA--
 C T G A T G C A A G T C G T A C C G T A C T A G A C T G G T A C A G T C G T C A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AACCAGGCCAAGG
---CGTGCCAAG-
 C T G A T G C A A G T C G T A C C G T A C T A G A C T G G T A C A G T C G T C A C G T A A C T G A C T G
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AACCAGGCCAAGG
----AGGCCTAG-
 C T G A T G C A A G T C G T A C C G T A C T A G A C T G G T A C A G T C G T C A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AACCAGGCCAAGG---
----AGGTCAAGGTCA
 C T G A T G C A A G T C G T A C C G T A C T A G A C T G G T A C A G T C G T C A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AACCAGGCCAAGG
----AGGCCTNG-
 C T G A T G C A A G T C G T A C C G T A C T A G A C T G G T A C A G T C G T C A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AACCAGGCCAAGG
---GGTGCCAAGT
 C T G A T G C A A G T C G T A C C G T A C T A G A C T G G T A C A G T C G T C A C G T A A C T G A C T G
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACCAGGCCAAGG
NTCAAGGTCA---
 C T G A T G C A A G T C G T A C C G T A C T A G A C T G G T A C A G T C G T C A C G T A A C T G A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T