Information for 4-GCTTTAATTC (Motif 15)

C T A G A G T C A C G T A C G T C G A T T G C A C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A G T C A A C G T A C G T C G T A C G T A C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.244e+01
Information Content per bp:1.881
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif27.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets53.3 +/- 28.6bp
Average Position of motif in Background47.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GCTTTAATTC
--TTTAAT--
 C T A G A G T C A C G T A C G T C G A T T G C A C G T A A C G T A C G T A G T C
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCTTTAATTC
-CACTAATT-
 C T A G A G T C A C G T A C G T C G A T T G C A C G T A A C G T A C G T A G T C
A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTAATTC-----
NNNNTGAATTCANNNC
 A C G T C T A G A G T C A C G T A C G T C G A T T G C A C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

MNX1/MA0707.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTTTAATTC--
--TTTAATTANN
 C T A G A G T C A C G T A C G T C G A T T G C A C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTAATTC-----
NNCATTCATTCATNNN
 A C G T C T A G A G T C A C G T A C G T C G A T T G C A C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

LMX1B/MA0703.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCTTTAATTC-
---TTAATTAN
 C T A G A G T C A C G T A C G T C G A T T G C A C G T A A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A G C T C G A T G C T A G C T A C G A T G C A T C T G A T G C A

PH0011.1_Alx1_2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTTTAATTC------
CGCATTAATTAATTGGC
 A C G T C T A G A G T C A C G T A C G T C G A T T G C A C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTAATTC
TGGTTTCAGT-
 A C G T C T A G A G T C A C G T A C G T C G A T T G C A C G T A A C G T A C G T A G T C
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCTTTAATTC-
-TTTTTATTGC
 C T A G A G T C A C G T A C G T C G A T T G C A C G T A A C G T A C G T A G T C A C G T
A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

PRRX1/MA0716.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCTTTAATTC-
---NTAATTAN
 C T A G A G T C A C G T A C G T C G A T T G C A C G T A A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A G C T C G A T C T G A C T G A C A G T A G C T C T G A T C A G