Information for 19-SCTKYMAATCCCT (Motif 43)

A T C G A G T C A G C T A C G T A G T C G T A C C G T A C T G A A C G T A G T C A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G A C T G C G T A A G C T A C G T A C T G C T A G T G C A C T G A A C T G A T G C
p-value:1e-6
log p-value:-1.455e+01
Information Content per bp:1.847
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.7 +/- 0.9bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0137.1_Pitx1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:SCTKYMAATCCCT----
NTTGTTAATCCCTCTNN
 A T C G A G T C A G C T A C G T A G T C G T A C C G T A C T G A A C G T A G T C A G T C A G T C C G A T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:SCTKYMAATCCCT-
----CAAATCACTG
 A T C G A G T C A G C T A C G T A G T C G T A C C G T A C T G A A C G T A G T C A G T C A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:SCTKYMAATCCCT
ACTACAATTCCC-
 A T C G A G T C A G C T A C G T A G T C G T A C C G T A C T G A A C G T A G T C A G T C A G T C C G A T
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:SCTKYMAATCCCT
---NYTAATCCYB
 A T C G A G T C A G C T A C G T A G T C G T A C C G T A C T G A A C G T A G T C A G T C A G T C C G A T
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:SCTKYMAATCCCT
NCTGTCAATCAN-
 A T C G A G T C A G C T A C G T A G T C G T A C C G T A C T G A A C G T A G T C A G T C A G T C C G A T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:SCTKYMAATCCCT
---CTTAATCCC-
 A T C G A G T C A G C T A C G T A G T C G T A C C G T A C T G A A C G T A G T C A G T C A G T C C G A T
A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

PH0130.1_Otx2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-SCTKYMAATCCCT---
GANNATTAATCCCTNNN
 A C G T A T C G A G T C A G C T A C G T A G T C G T A C C G T A C T G A A C G T A G T C A G T C A G T C C G A T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:SCTKYMAATCCCT
-----TAATCCCN
 A T C G A G T C A G C T A C G T A G T C G T A C C G T A C T G A A C G T A G T C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-SCTKYMAATCCCT---
GNNNATTAATCCCTNCN
 A C G T A T C G A G T C A G C T A C G T A G T C G T A C C G T A C T G A A C G T A G T C A G T C A G T C C G A T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-SCTKYMAATCCCT--
GNNAGCTAATCCCCCN
 A C G T A T C G A G T C A G C T A C G T A G T C G T A C C G T A C T G A A C G T A G T C A G T C A G T C C G A T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T