Information for 10-CCATACATTG (Motif 42)

A G T C A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.455e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.0 +/- 7.8bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCATACATTG
CCATATATGG
 A G T C A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C T G
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

SRF/MA0083.3/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCATACATTG---
TGNCCATATATGGTCA
 A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCATACATTG-----
NNCATTCATTCATNNN
 A C G T A G T C A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCATACATTG--
CCATATATGGNA
 A G T C A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCATACATTG-
ATTTGCATACAATGG
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0078.1_Srf_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCATACATTG--
TTCCATATATGGAA
 A C G T A C G T A G T C A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCATACATTG--
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCATACATTG--
---CTCATTGTC
 A G T C A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCATACATTG
NTTGATACATT-
 A C G T A C G T A G T C A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C T G
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCATACATTG-
KCCAAAAATAGC
 A C G T A G T C A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C