Information for 18-GGGTGCTGAGGTC (Motif 41)

A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G G A C T A T G C
Reverse Opposite:
A T C G C T G A A G T C A G T C A C G T A G T C C G T A A C T G A G T C C G T A A G T C A G T C G T A C
p-value:1e-6
log p-value:-1.467e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.7 +/- 24.4bp
Average Position of motif in Background75.7 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGTGCTGAGGTC
AATTTGCTGAC---
 A C G T A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G G A C T A T G C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGGTGCTGAGGTC
---TGCTGACTCA
 A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G G A C T A T G C
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGTGCTGAGGTC
AAAATGCTGACT--
 A C G T A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G G A C T A T G C
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGGTGCTGAGGTC----
--NTGCTGAGTCATCCN
 A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G G A C T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGGTGCTGAGGTC
NNCGTTGCTATGGNN
 A C G T A C G T A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G G A C T A T G C
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.56
Offset:-11
Orientation:forward strand
Alignment:-----------GGGTGCTGAGGTC
GGAGCTGTCCATGGTGCTGA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G G A C T A T G C
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGTGCTGAGGTC-
AGGGGTCAGAGGTCA
 A C G T A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G G A C T A T G C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGGTGCTGAGGTC-
--HTGCTGAGTCAT
 A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G G A C T A T G C A C G T
A C G T A C G T G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GGGTGCTGAGGTC-
------TRAGGTCA
 A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G G A C T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GGGTGCTGAGGTC----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G G A C T A T G C A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A