Information for 10-TGCYCTTGSWGGGARG (Motif 15)

A C G T A C T G A G T C A G T C A T G C A C G T A C G T A T C G T A G C C G T A A C T G A C T G A T C G G C T A C T A G A T C G
Reverse Opposite:
A T G C A G T C C G A T A T G C G T A C A G T C C G A T A T C G A T G C G T C A C G T A A T C G C T A G T C A G T G A C C G T A
p-value:1e-10
log p-value:-2.426e+01
Information Content per bp:1.744
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.5 +/- 26.2bp
Average Position of motif in Background61.9 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCYCTTGSWGGGARG
-TCNCCTGCTGNGNNN
 A C G T A C T G A G T C A G T C A T G C A C G T A C G T A T C G T A G C C G T A A C T G A C T G A T C G G C T A C T A G A T C G
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGCYCTTGSWGGGARG
-TNTCCTGCTGTGNNG
 A C G T A C T G A G T C A G T C A T G C A C G T A C G T A T C G T A G C C G T A A C T G A C T G A T C G G C T A C T A G A T C G
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCYCTTGSWGGGARG
-CCCCCTGCTGTG---
 A C G T A C T G A G T C A G T C A T G C A C G T A C G T A T C G T A G C C G T A A C T G A C T G A T C G G C T A C T A G A T C G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGCYCTTGSWGGGARG
BNTGDCCTTG--------
 A C G T A C G T A C G T A C T G A G T C A G T C A T G C A C G T A C G T A T C G T A G C C G T A A C T G A C T G A T C G G C T A C T A G A T C G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGCYCTTGSWGGGARG-
------GGGCGGGAAGG
 A C G T A C T G A G T C A G T C A T G C A C G T A C G T A T C G T A G C C G T A A C T G A C T G A T C G G C T A C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

GLIS3/MA0737.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGCYCTTGSWGGGARG--
----CTTCGTGGGGGGTC
 A C G T A C T G A G T C A G T C A T G C A C G T A C G T A T C G T A G C C G T A A C T G A C T G A T C G G C T A C T A G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGCYCTTGSWGGGARG
----BTKGGCGGGAAA
 A C G T A C T G A G T C A G T C A T G C A C G T A C G T A T C G T A G C C G T A A C T G A C T G A T C G G C T A C T A G A T C G
A C G T A C G T A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCYCTTGSWGGGARG
TGACCTTGAV------
 A C G T A C T G A G T C A G T C A T G C A C G T A C G T A T C G T A G C C G T A A C T G A C T G A T C G G C T A C T A G A T C G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGCYCTTGSWGGGARG--
-GTATTGGGTGGGTAATT
 A C G T A C T G A G T C A G T C A T G C A C G T A C G T A T C G T A G C C G T A A C T G A C T G A T C G G C T A C T A G A T C G A C G T A C G T
A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCYCTTGSWGGGARG
TGACCTTGAN------
 A C G T A C T G A G T C A G T C A T G C A C G T A C G T A T C G T A G C C G T A A C T G A C T G A T C G G C T A C T A G A T C G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T