Information for 8-TGGAGAGGTCCTGCAG (Motif 11)

C G A T A C T G A T C G C G T A A C T G C T G A A C T G C T A G C G A T A T G C A G T C A C G T A C T G A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G A G T C C G T A A C T G A T C G C G T A A G T C A G T C A G C T A G T C C G A T A T G C A G T C C G T A
p-value:1e-11
log p-value:-2.553e+01
Information Content per bp:1.915
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 23.6bp
Average Position of motif in Background44.9 +/- 38.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TGGAGAGGTCCTGCAG
-----ACATCCTGNT-
 C G A T A C T G A T C G C G T A A C T G C T G A A C T G C T A G C G A T A T G C A G T C A C G T A C T G A G T C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TGGAGAGGTCCTGCAG--
---AGAGRRACAGCWGAC
 C G A T A C T G A T C G C G T A A C T G C T G A A C T G C T A G C G A T A T G C A G T C A C G T A C T G A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TGGAGAGGTCCTGCAG---
----GGCCYCCTGCTGDGH
 C G A T A C T G A T C G C G T A A C T G C T G A A C T G C T A G C G A T A T G C A G T C A C G T A C T G A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TGGAGAGGTCCTGCAG
BTBRAGTGSN-------
 A C G T C G A T A C T G A T C G C G T A A C T G C T G A A C T G C T A G C G A T A T G C A G T C A C G T A C T G A G T C C G T A A T C G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TGGAGAGGTCCTGCAG
TTGAGTGSTT------
 C G A T A C T G A T C G C G T A A C T G C T G A A C T G C T A G C G A T A T G C A G T C A C G T A C T G A G T C C G T A A T C G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:forward strand
Alignment:TGGAGAGGTCCTGCAG
---AGRGGTCA-----
 C G A T A C T G A T C G C G T A A C T G C T G A A C T G C T A G C G A T A T G C A G T C A C G T A C T G A G T C C G T A A T C G
A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.48
Offset:9
Orientation:forward strand
Alignment:TGGAGAGGTCCTGCAG---
---------CCTGCTGAGH
 C G A T A C T G A T C G C G T A A C T G C T G A A C T G C T A G C G A T A T G C A G T C A C G T A C T G A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:TGGAGAGGTCCTGCAG-----
------NNTCCTGCTGTGNNN
 C G A T A C T G A T C G C G T A A C T G C T G A A C T G C T A G C G A T A T G C A G T C A C G T A C T G A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TGGAGAGGTCCTGCAG
GGCGAGGGGTCAAGGGC
 A C G T C G A T A C T G A T C G C G T A A C T G C T G A A C T G C T A G C G A T A T G C A G T C A C G T A C T G A G T C C G T A A T C G
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGAGGTCCTGCAG
CTTGAGTGGCT------
 A C G T C G A T A C T G A T C G C G T A A C T G C T G A A C T G C T A G C G A T A T G C A G T C A C G T A C T G A G T C C G T A A T C G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T