Information for 4-GGACACCATG (Motif 10)

A T C G A T C G T C G A A T G C C T G A A G T C A G T C G C T A C G A T A C T G
Reverse Opposite:
T G A C C G T A C G A T A C T G A C T G A G C T A T C G A G C T A T G C A T G C
p-value:1e-9
log p-value:-2.179e+01
Information Content per bp:1.838
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif102.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets42.9 +/- 27.0bp
Average Position of motif in Background52.1 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGACACCATG--
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T A C G T A T C G A T C G T C G A A T G C C T G A A G T C A G T C G C T A C G A T A C T G A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGACACCATG----
CTCACACAATGGCGC
 A C G T A T C G A T C G T C G A A T G C C T G A A G T C A G T C G C T A C G A T A C T G A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

NR3C2/MA0727.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGACACCATG-----
GGGAACACAATGTTCCC
 A C G T A C G T A T C G A T C G T C G A A T G C C T G A A G T C A G T C G C T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

Ar/MA0007.3/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGACACCATG-----
NGGTACACNGTGTTCCC
 A C G T A C G T A T C G A T C G T C G A A T G C C T G A A G T C A G T C G C T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

NR3C1/MA0113.3/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGACACCATG-----
GGGTACATAATGTTCCC
 A C G T A C G T A T C G A T C G T C G A A T G C C T G A A G T C A G T C G C T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGACACCATG----
NAGAACAGNCTGTNCT
 A C G T A C G T A T C G A T C G T C G A A T G C C T G A A G T C A G T C G C T A C G A T A C T G A C G T A C G T A C G T A C G T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGACACCATG-----
AGNACANNNTGTNCTN
 A C G T A T C G A T C G T C G A A T G C C T G A A G T C A G T C G C T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGACACCATG-----
GRACAGWMTGTYCTB
 A T C G A T C G T C G A A T G C C T G A A G T C A G T C G C T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGACACCATG----
AGGTCACCCTGACCT
 A C G T A T C G A T C G T C G A A T G C C T G A A G T C A G T C G C T A C G A T A C T G A C G T A C G T A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGACACCATG---
NAGGTCACNNTGACC
 A C G T A C G T A T C G A T C G T C G A A T G C C T G A A G T C A G T C G C T A C G A T A C T G A C G T A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C