Information for 11-CGGCAGGGGCAAA (Motif 14)

A T G C A C T G A C T G A G T C C G T A A C T G A C T G C T A G A C T G A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G G T A C A G T C A G T C A G T C A C G T A C T G A G T C A G T C A T C G
p-value:1e-5
log p-value:-1.368e+01
Information Content per bp:1.924
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.5 +/- 27.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGGCAGGGGCAAA
SDGCAGGTGCNS-
 A T G C A C T G A C T G A G T C C G T A A C T G A C T G C T A G A C T G A G T C C G T A C G T A C G T A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGGCAGGGGCAAA--
ATCCACAGGTGCGAAAA
 A C G T A C G T A T G C A C T G A C T G A G T C C G T A A C T G A C T G C T A G A C T G A G T C C G T A C G T A C G T A A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGGCAGGGGCAAA
CACAGCAGGGGG---
 A C G T A C G T A T G C A C T G A C T G A G T C C G T A A C T G A C T G C T A G A C T G A G T C C G T A C G T A C G T A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGCAGGGGCAAA
-GACAGGTGTN--
 A T G C A C T G A C T G A G T C C G T A A C T G A C T G C T A G A C T G A G T C C G T A C G T A C G T A
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGGCAGGGGCAAA
--GGAGGGGGAA-
 A T G C A C T G A C T G A G T C C G T A A C T G A C T G C T A G A C T G A G T C C G T A C G T A C G T A
A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGCAGGGGCAAA
-GGGGGGGG----
 A T G C A C T G A C T G A G T C C G T A A C T G A C T G C T A G A C T G A G T C C G T A C G T A C G T A
A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGGCAGGGGCAAA
TGGGGAAGGGCM--
 A C G T A T G C A C T G A C T G A G T C C G T A A C T G A C T G C T A G A C T G A G T C C G T A C G T A C G T A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CGGCAGGGGCAAA
---CAAGGHCANV
 A T G C A C T G A C T G A G T C C G T A A C T G A C T G C T A G A C T G A G T C C G T A C G T A C G T A
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGGCAGGGGCAAA
-NNCAGGTGCG--
 A T G C A C T G A C T G A G T C C G T A A C T G A C T G C T A G A C T G A G T C C G T A C G T A C G T A
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGGCAGGGGCAAA
TGGCACGTGCCA-
 A T G C A C T G A C T G A G T C C G T A A C T G A C T G C T A G A C T G A G T C C G T A C G T A C G T A
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T