Motif 12

Information for 9-ACCCCGCACRMSK (Motif 12)

Reverse Opposite:

p-value:	1e-7
log p-value:	-1.772e+01
Information Content per bp:	1.871
Number of Target Sequences with motif	5.0
Percentage of Target Sequences with motif	0.54%
Number of Background Sequences with motif	4.9
Percentage of Background Sequences with motif	0.01%
Average Position of motif in Targets	58.4 +/- 28.2bp
Average Position of motif in Background	39.3 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)	2.0
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

GLIS3/MA0737.1/Jaspar

Match Rank:	1
Score:	0.76
Offset:	-1
Orientation:	forward strand
Alignment:	-ACCCCGCACRMSK GACCCCCCACGAAG

GLIS1/MA0735.1/Jaspar

Match Rank:	2
Score:	0.73
Offset:	-2
Orientation:	forward strand
Alignment:	--ACCCCGCACRMSK- AGACCCCCCACGAAGC

GLIS2/MA0736.1/Jaspar

Match Rank:	3
Score:	0.71
Offset:	-1
Orientation:	forward strand
Alignment:	-ACCCCGCACRMSK GACCCCCCGCGAAG

PB0025.1_Glis2_1/Jaspar

Match Rank:	4
Score:	0.69
Offset:	-5
Orientation:	forward strand
Alignment:	-----ACCCCGCACRMSK TATCGACCCCCCACAG--

PB0039.1_Klf7_1/Jaspar

Match Rank:	5
Score:	0.67
Offset:	-3
Orientation:	forward strand
Alignment:	---ACCCCGCACRMSK TCGACCCCGCCCCTAT

PB0107.1_Ascl2_2/Jaspar

Match Rank:	6
Score:	0.64
Offset:	-3
Orientation:	forward strand
Alignment:	---ACCCCGCACRMSK CTATCCCCGCCCTATT

GCM2/MA0767.1/Jaspar

Match Rank:	7
Score:	0.64
Offset:	0
Orientation:	reverse strand
Alignment:	ACCCCGCACRMSK TACCCGCATN---

ZNF740/MA0753.1/Jaspar

Match Rank:	8
Score:	0.64
Offset:	-1
Orientation:	forward strand
Alignment:	-ACCCCGCACRMSK CCCCCCCCAC----

PB0024.1_Gcm1_1/Jaspar

Match Rank:	9
Score:	0.62
Offset:	-3
Orientation:	forward strand
Alignment:	---ACCCCGCACRMSK TCGTACCCGCATCATT

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:	10
Score:	0.62
Offset:	-2
Orientation:	forward strand
Alignment:	--ACCCCGCACRMSK NRGCCCCRCCCHBNN