Information for 5-SCCAAKAGCCTCAGYS (Motif 11)

A T G C A G T C T G A C G T C A C G T A C A G T C G T A A C T G T A G C A G T C C G A T T A G C C T G A A C T G A G T C A T C G
Reverse Opposite:
A T G C T C A G G T A C A G C T A C T G G C T A A C T G A C T G A G T C A C G T G T C A A C G T A C G T A C T G A C T G A T C G
p-value:1e-8
log p-value:-1.906e+01
Information Content per bp:1.761
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets37.2 +/- 22.2bp
Average Position of motif in Background43.0 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:5
Orientation:forward strand
Alignment:SCCAAKAGCCTCAGYS
-----GAGSCCGAGC-
 A T G C A G T C T G A C G T C A C G T A C A G T C G T A A C T G T A G C A G T C C G A T T A G C C T G A A C T G A G T C A T C G
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:SCCAAKAGCCTCAGYS-
------AGCCTCAGGCA
 A T G C A G T C T G A C G T C A C G T A C A G T C G T A A C T G T A G C A G T C C G A T T A G C C T G A A C T G A G T C A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:SCCAAKAGCCTCAGYS-
------AGCCTCAGGCA
 A T G C A G T C T G A C G T C A C G T A C A G T C G T A A C T G T A G C A G T C C G A T T A G C C T G A A C T G A G T C A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:SCCAAKAGCCTCAGYS
AGCAACAGCCGCACC-
 A T G C A G T C T G A C G T C A C G T A C A G T C G T A A C T G T A G C A G T C C G A T T A G C C T G A A C T G A G T C A T C G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:SCCAAKAGCCTCAGYS---
----NTNGCCTCAGGCNNN
 A T G C A G T C T G A C G T C A C G T A C A G T C G T A A C T G T A G C A G T C C G A T T A G C C T G A A C T G A G T C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:SCCAAKAGCCTCAGYS-
------CGCCTCAGGCA
 A T G C A G T C T G A C G T C A C G T A C A G T C G T A A C T G T A G C A G T C C G A T T A G C C T G A A C T G A G T C A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:SCCAAKAGCCTCAGYS---
----ATTGCCTCAGGCAAT
 A T G C A G T C T G A C G T C A C G T A C A G T C G T A A C T G T A G C A G T C C G A T T A G C C T G A A C T G A G T C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:SCCAAKAGCCTCAGYS
-----AAACCACAGAN
 A T G C A G T C T G A C G T C A C G T A C A G T C G T A A C T G T A G C A G T C C G A T T A G C C T G A A C T G A G T C A T C G
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:SCCAAKAGCCTCAGYS
----WTGSCCTSAGGS
 A T G C A G T C T G A C G T C A C G T A C A G T C G T A A C T G T A G C A G T C C G A T T A G C C T G A A C T G A G T C A T C G
A C G T A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:SCCAAKAGCCTCAGYS---
-------GCCTCAGGGCAT
 A T G C A G T C T G A C G T C A C G T A C A G T C G T A A C T G T A G C A G T C C G A T T A G C C T G A A C T G A G T C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T