Information for 11-AATGGATTTG (Motif 20)

C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A G T C A C G T A A C G T A G T C A G T C C G T A A C G T A C G T
p-value:1e-5
log p-value:-1.342e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets66.6 +/- 32.1bp
Average Position of motif in Background38.1 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AATGGATTTG
TAATTGATTA-
 A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C T G
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AATGGATTTG-
-ATTGATTYND
 C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C G T
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PAX3/MA0780.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AATGGATTTG
TAATCGATTA-
 A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C T G
C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A A C G T

PAX7/MA0680.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AATGGATTTG
TAATCGATTA-
 A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C T G
C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AATGGATTTG
CCTTAATNGNTTTT
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C T G
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------AATGGATTTG
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C T G
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PH0088.1_Isl2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----AATGGATTTG-
AAATTAATTGATTTNG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C G T
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G

ONECUT1/MA0679.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AATGGATTTG--
ANTATCGATTTTTN
 A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AATGGATTTG--
ATTATCGATTTTTT
 A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AATGGATTTG
NTAATKGTTT--
 A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C T G
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T